Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05015 ATGACGGGGAAAGATCCTGTTAAAGTTCTTAAACATGCACTCTCACAAACACTTGTTTATTACTATCCATTTGCAGGAAGGATTAGAGAGGGTGTTGGGCGCAAGTTGATGGTTGATTGTACCGGCGAAGGTGTCATGTTTGTTGAAGCTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTCTCCAACCACCATTCCCTTGCTTCCAAGAACTTCTACATGATGTTGAAGACTCCGAATTAATTATTGACCGTCCCATTCGACTCATACAGGTGACACGTTTCAAGTGTGGTGGTTTCATGTTATCCATAAGTTGGAACCATACAATTGGTGATGCATCTGGTTTGAAACAATTCATGGATGCTTGGGCAGAAATGGCTCGAGGAGCATATCAACCTTCCATTCAACCTATTTGGCGTAGAGAGCTTCTAATGGCTAGAAATCCACCACACATTACATGCACCCATCGTGAATACGAACAAATTATACTTCCTCCAAATATCATGAAGAGATTTGCTAAAGAGTTAGATGAGATGTTTGGTACCCAAAATCATCCTACAATGAGTGGATCTTGTTTTGTCATGTCTACTTTGTAG 600 0.41 MTGKDPVKVLKHALSQTLVYYYPFAGRIREGVGRKLMVDCTGEGVMFVEAEADVTLDQFGDSLQPPFPCFQELLHDVEDSELIIDRPIRLIQVTRFKCGGFMLSISWNHTIGDASGLKQFMDAWAEMARGAYQPSIQPIWRRELLMARNPPHITCTHREYEQIILPPNIMKRFAKELDEMFGTQNHPTMSGSCFVMSTL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05015 199 Gene3D - 2 162 IPR023213 -
Trre14g05015 199 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 172 - -
Trre14g05015 199 Pfam Transferase family 6 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05015 Trre-Chr14 56621560 56625301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05015 5 161 Monolignol Biosynthesis Gene Families AT5G48930 38.854 8.79e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05015 K19861 - gmx:100787907 252.292