Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05014 ATGGAAAAGGTTGATCTGTCTAGGATATCTCTCAGACCATTCAAGCTAACATACGTTGATGATTTCTTGTTATGGGCAGGGGACAATGAAGTAACCAAAAACCTCAGATGGAAAACATACAATTCAAAGGAAGAAGCTCTAACATTCATTAGAGATGTCTGCATACCTCATCCATGGCGCCGTTCTATCTGTCTCGATGACCGTCCAATCGGTTTTGTTTCGGTGTATCGATGGTCGGGTGATGATAGGTGCAAAGCTGACATAGGTTATGCAGTTGCTTCTAACTATTGGGGACAAGGGATAGCCACAAAAGCAATCAAAATTGCTTTGTCTCAAGTGTTTAATGTTTTTTCTGATTTGTTAAGGTTGCAGGCTTTTGTTTATGTGGAGAACAAGGCTTCTCAAAGAGTTTTGGAAAAGGCTGGGTTCCTTAGAGAGGGTGTTCTTAGAAAGTATACTTTTATCAAAGTCACCGCTCAAACTCAATTTCTCTTCACTCTCAATTTCAATCAAAAACGCAAATCAAATTGCAAATCGCGAACCGCAAACCGCATCTTCCTCCACCTTCTCTCAAGTTCAATTCTCACAGTCACAAATCGTAAAACGCGAATCACGTTTCATAGTTCGCAAATCTCATCTTCCTCCACCTTCTATCAATTTCAATCGTCGCAGATTTCACACAAATCTCAATCGTTGCAGAACTCACGCAAATCGCAATCGCTCCTCAATCAGAGTGTTAGGGTTCCTCAAAGTCTCAATCGCAGTGTTACTCCACACTTTCTCTCAATCTCATCTCTCAATTGCAATGTTGCATCTCAATCGATGACGAGCTTATCGGGATCCTCTTGTTTGAGGACTCTGGGTCAAGATCAGTCATCTTATGGTTTTTCCATAGCATCTGAGCATCAACCTCCAGTTTGGAGTGGTAGCAATTACTTTCCCATGTGCAATAGTGTGATTTTAAGAGCTTGTAGCAAGATGGGAAGGAAATCATATGTGCAAGGTTATGAACGCCGCACTACTTATAATATGTCTAATCTACCAGTTAGGCTTGGAGAATATTCCTATGGCAGGAGTTTGGCTCGTTTTTCTGCAACTCTAGGACCTACTGCTTGGAGAATAGCTTACCAGAAGATTCAACAGGCACTGCCAATATTAAAAAAAAGGCCATGA 1173 0.4126 MEKVDLSRISLRPFKLTYVDDFLLWAGDNEVTKNLRWKTYNSKEEALTFIRDVCIPHPWRRSICLDDRPIGFVSVYRWSGDDRCKADIGYAVASNYWGQGIATKAIKIALSQVFNVFSDLLRLQAFVYVENKASQRVLEKAGFLREGVLRKYTFIKVTAQTQFLFTLNFNQKRKSNCKSRTANRIFLHLLSSSILTVTNRKTRITFHSSQISSSSTFYQFQSSQISHKSQSLQNSRKSQSLLNQSVRVPQSLNRSVTPHFLSISSLNCNVASQSMTSLSGSSCLRTLGQDQSSYGFSIASEHQPPVWSGSNYFPMCNSVILRACSKMGRKSYVQGYERRTTYNMSNLPVRLGEYSYGRSLARFSATLGPTAWRIAYQKIQQALPILKKRP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05014 390 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 156 IPR016181 -
Trre14g05014 390 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 170 IPR000182 GO:0016747
Trre14g05014 390 Gene3D - 3 166 - -
Trre14g05014 390 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 167 - -
Trre14g05014 390 Pfam Acetyltransferase (GNAT) domain 8 143 IPR000182 GO:0016747
Trre14g05014 390 CDD NAT_SF 63 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05014 Trre-Chr14 56603704 56609851 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre14g05014 Acetyltransf_3 5.8e-20 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05014 - - gmx:100527210 266.544