Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g05001 ATGGCTCTTCATTTATTTCAAATGCTAAAAACTTCGGATTATGCGTCCGTAATATCTATGAACCTATTTGTTGCATTGCTATGTGCTTGTATAGTCATTGGCCATCTTCTTGAGGAGAATCGATGGATTAACGAGTCTATCACTGCCCTTTTAATAGGTCTATGTACTGGTGTGGTGATTTTGTGGATAAGCAATGGTAAAAACTCGCATCTACTTGTTTTTAGTGAAGATCTATTTTTTATATATCTTCTACCTCCCATCATCTTTAATGCCGGGTTTCAGGTGAAAAAGAAACGGTTTTTCGTTAATTTCATCACCATCATGATGTTTGGTGCCATTGGTACATTAATAAGCTGTAGCATCATATCTTTTGGTGTGACACAAATTTTTAAGAGATTGGGTCTTGGTACCCTGGAGCTAGGGGAGGCTCTAGCAATTGGTGCAATATTTGCTGCAACAGATTCTGTGTGCACGTTGCAGGTGTTAAACCAGGATGAGACACCTTTACTATACAGCCTTGTATTTGGTGAAGGTGTTGTGAATGATGCTACTTCAGTGGTTCTTTTCAATGCAATCAAAAGTTTTGATCTTGAACAACCTGGCCATGGAATTGCTTTGCAATTTTTTGGCAACTTCTTGTATTTGTTTATAGCAAGCACCATGCTTGGATTTTTGGGTGGTCTACTTAGTGCATACATTATCAAAAAGCTCTATTTTGGAAGGCACTCGACTGATCGTGAGGTTGCTCTGATGATGCTAATGGCATACCTTACCTACATTTTGGCTGAATTATGGTTTCTTAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTAATGTCTCATTATACATGGCATAATGTGACTGAGAGCTCAAGAATCACTACCAAACATTCTTTTGCAACCCTGTCATTTGTTGCTGAGACATTTCTCTTCCTTTATGTTGGTATGGATGCATTGGACATTGAAAAATGGAGATTTGTTAGTGATAGACCTGGAACATCTGTCAGTGTGAGTTCAGTATTATTAGCTCTAGTACTCATTGGAAGAGCAGCATTTGTTTTCCCCTTATCCTTCTTAATCAACTTGACTAAAAAGTCAGAAAATGATAAACTAAGCTTCAGCATGCAGGTGATCATTTGGTGGGCAGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATGAGTTTTCTAGTGTATCTGGGCATGGGCATGCTCAATTGCGATTCAATGCTACCATGATCACAAGTACCATCACTGTTGTGCTTGTTAGTACAATGGTGTTTGGTATGATGACAAAGCCATTAATAAGATATTTACTACCTCTTCCTCCTCCAAAACGGAAAAACAGCACTGTGAGTCTTGATGAATCTGCTTCACCTTCACCAAAATCAATCACTGTGCCATTCCTTGGAGCTAACCATGATTCTGAAGTTGAAACTGATGCCACTGATTCTCAACGTCCGAGCAGCATTCGTGATTTACTCACCACTCCAACACACACTGTCCATCGGTTATGGCGTAGGTTTGATGATGCATTTATGCGTCCGGTTTTTGGTGGTAGGGGTTTTGTTCCTTTTGTTCCTACCTCGCCAACCGAGTGCAGCGGTCATCCAAGTCCCGAATGGGAATGA 1641 0.4016 MALHLFQMLKTSDYASVISMNLFVALLCACIVIGHLLEENRWINESITALLIGLCTGVVILWISNGKNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKRFFVNFITIMMFGAIGTLISCSIISFGVTQIFKRLGLGTLELGEALAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLEQPGHGIALQFFGNFLYLFIASTMLGFLGGLLSAYIIKKLYFGRHSTDREVALMMLMAYLTYILAELWFLSGILTVFFCGIVMSHYTWHNVTESSRITTKHSFATLSFVAETFLFLYVGMDALDIEKWRFVSDRPGTSVSVSSVLLALVLIGRAAFVFPLSFLINLTKKSENDKLSFSMQVIIWWAGLMRGAVSMALAYNEFSSVSGHGHAQLRFNATMITSTITVVLVSTMVFGMMTKPLIRYLLPLPPPKRKNSTVSLDESASPSPKSITVPFLGANHDSEVETDATDSQRPSSIRDLLTTPTHTVHRLWRRFDDAFMRPVFGGRGFVPFVPTSPTECSGHPSPEWE 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g05001 546 Gene3D - 139 191 - -
Trre14g05001 546 MobiDBLite consensus disorder prediction 453 469 - -
Trre14g05001 546 PANTHER SODIUM/HYDROGEN EXCHANGER 11 521 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trre14g05001 546 PRINTS Na+/H+ exchanger signature 107 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre14g05001 546 PRINTS Na+/H+ exchanger signature 92 106 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre14g05001 546 PRINTS Na+/H+ exchanger signature 147 157 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre14g05001 546 PRINTS Na+/H+ exchanger signature 78 89 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre14g05001 546 MobiDBLite consensus disorder prediction 452 472 - -
Trre14g05001 546 Pfam Sodium/hydrogen exchanger family 23 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g05001 Trre-Chr14 56522293 56527209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g05001 9 540 Antiporters AT3G05030 75.281 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g05001 - - tpra:123890854 993.03