Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04993 ATGGAGTGCAACAAGGATGAGGCTCTGAGGGCGAAGCAAATTGCTGAAAACAGAATGCAAAGTGGCGACTATGTAGGGGGACTGAAGTTTGCTACAAAAGCTCAACGACTGTTTCCTGAGATCCAGAACATTACTCAGATCCTTACTGTCTGTGAGGTTCACTGTGCTGCACAGAATAAACTCTCTACGTCTGATATGGACTGGTATGGAATACTTCTGACTGATAAATTTACCGAAGAAGCAACAATAAAGAAACAGTATAAAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAGATCTGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGTGGAAGCCAACAGAGTATTGAGTGACCCAACAAAACGTTCTTTATATAACGCGAAGATTAGCCGCCTTGTTGGAATTACAGCATCACAGGTTCCATCCCATCACTCAGATAGGAGTTATTTTGGGGTGAAAGTTGATGAAAATGCTAGAAATTACCATAACTCAAATCAGCAGGATGAACGGGCTACATTTTGGACATCATGCCAACACTGTAATACTAAGTACCAGTACTACAGAGCCATTGTAAATGCCACCTTGCATTGTCAACAATGTTCTAAACCCTTTAAAGCTCGTGATATAGGGTTCTATGCACCAACAGGACACACATCACCATCATTTAACAGTCATAAAGGTCCTCCAAACCATGTGCCACCAAAAGAAACATCGAAAAGTAATGGCAGAAAACCTTATGGTAAAGGACCGGAGGAGAAATTTGTGCCTCCTTGTCCTGTACCTATGGCAAAATGTAGTGCTGGAAATGGCGACTCTTGCAAAGTTCGAAAGAGTAAAGACGGCCATGGGGCTGCAGGAGTGACAAAGTCTAGTGCTGGAACAAGCAACGGTGCTACATCCAAAGCCAAGCAATCACAAATTCCAACAAATGTTGGAAGTAAGAGAGCAAGGCAATCAGCATCAGCAGAGTTTGAGAGTGCCTCCAAAAGGCCACAACAAGATAAATCATTTAAGACCACTAAAGTGGAGAAACAAGAAGTACCTGGAAATGGTGGGTTCAATAACACAAGTCCAGCTCGTTTCGCTGCCAATGTGGTTGGTCAGAATGGAGAGATAAGAAATAAAGCAAATGCCCAGCCTGAAAAAACAGTTTTAACGAAACAAATGAAATCGGATATTGATGATAGAAAGGCCAAAGCCGACAATTCTCAACTGAAATCGAATCTCCCTCCTGATGATGTGATTAGCTGTCCTGATCCAGATTTCAGTAATTTTGACAAGATAAAGACAGAGGATTCTTTTGTTGAGAATCAATTCTGGGCTATTTATGATGATACTGATTGTATGCCAAGATTCTATGCTCGCATCAAGAAGGTTCACTCCCCTTTCAAGCTAGAATATACTTGGCTGGAACCTAATCCAAACCACAAAGATGAGATTGATTGGTATGATGCAGGTTTGCCTGTTGCATGCGGCAAGTACAAACTTGGTCATTCTCAAAAAACTAAAGATTGTGGTATGTTCTCTCATCAGGTGCATTGTATAAAAGGAAGTGCTAGAGGTTCCTATCTGGTATATCCCATGAAGGGAGAAACTTGGGCAATTTTCAAACATTGGGATATAGGATGGAGTTCCAATCCAGAAAAGAATTCAGAATATCAATTTGAATATGTGGAAATCCTATCTGATTTTGATGAGAAAGATGGTATTAAAGTTGCTTATCTCAGCAAATTGAAAGGGTTTGTTAGTCTCTTTCAGCAAACTGTGCAGAATGGGATTGGCTTCTTTTGCATTCCATCTAAGGAGTTGTATAGGTTTTCACATCGGGTTCCTTCATTTACAATGACTGGTAATGAAAGGGAAGACGTTCCAAGAGGATCATTTGAACTTGACCCTGCTGGCCTGCCTATGAGTGTTACTAAAGTTGAAGTTGGCGATCCTAGTGTTGTGAAGATGAAGGATGGAAAGTTAAACAAGGTAGTCAGTTCTCGCCAGGAATCCTCCAAGCGTAAAGTTGAACAGGCAAAGTCGAATGAGAGTATTCACAAAGCAAAGTTGCGAGAGAGTAATGGTACTGAAAGAGTTCCACCAATATTTAGAAGATCACCAAGGTCTAATGCGAAAAGTATGGACAATGGTCAAGCAAGCGCTAGTCAAAATATGGTCAGAGAGGATGACAAAAACAATAGCCAAAGGAACTACAGTCAACCAGAAGGAAGTGAAGCTGATGCAGTTCAGACCAATGAGAATTTCAAGAAACCAAAGAAACCTGAAAAGAGAAATTATCATGGAGAGACATTGACAGTTCGAAGGTCAGCTAGAGATTTAGGCAAGAAAAATGATGTAGGAGGTGCCGGTGAATGTGTAACTGGCAAATTGACTGATAATCATTCTAACACTAGCAATAATATTAAGGAAACTGTGTTTTCTCAGTCCGTGGGAAATGATAGTGCGCGTTTGAAAAAAGATTCTGGAGTTGTGGGTGCATGTTATGACTTTAATAAGGAAAAATCTAGGGAAATGTTTCAGCGTGGTCAGATATGGGCAATATATGGTGATAAGGATGGTATACCTGATGTTTATGTTCAAATCAAGAAGATTGAAACCACCGCTAATTTTAGGCTGCATGTATCTGAACTTGAACCCTGCTCGCCACCAAAAGGCTTGAAACAAACAATATCATGTGGCTCCTTCAAAATTAAAAAAGCCAAACTCCAAATTCTTTCTCCGTCTGCATTCTCTCATCAACTAAAAATTGAACCCATGGAAAATAGTATATATGAAATTTACCCTAAAAAAGGTGAGATTTGGGCATTATACAAGGACAAGAACTATGAACTTACTTCTTCAAACCAGGGCAGAGGAGAATGTCATATAGTAGAAGTATTAGCAGATAGTGACAAGAGTATACAAGTTGTTGTTCTGGTGCGTCTTAACAGATCTCAGCCAATTTTCAAGGCTCCCATTATTCGGCGATCTAAGACCAGTATAATTGAAATATTAAGAGAAGAGGTTGGTAGATTTTCACATCAGGTTCCTGCTTTTCAGCCCAGCGGGGAAGATGATGTTCATCTAAGAGGATGTTGGGTGGTCAATCCTTCCTCAATTCCTGGTTTTTCATACACTTGGAACGAACTATAG 3147 0.4032 MECNKDEALRAKQIAENRMQSGDYVGGLKFATKAQRLFPEIQNITQILTVCEVHCAAQNKLSTSDMDWYGILLTDKFTEEATIKKQYKKLALLLHPDKNRSAGAEAAFKLIVEANRVLSDPTKRSLYNAKISRLVGITASQVPSHHSDRSYFGVKVDENARNYHNSNQQDERATFWTSCQHCNTKYQYYRAIVNATLHCQQCSKPFKARDIGFYAPTGHTSPSFNSHKGPPNHVPPKETSKSNGRKPYGKGPEEKFVPPCPVPMAKCSAGNGDSCKVRKSKDGHGAAGVTKSSAGTSNGATSKAKQSQIPTNVGSKRARQSASAEFESASKRPQQDKSFKTTKVEKQEVPGNGGFNNTSPARFAANVVGQNGEIRNKANAQPEKTVLTKQMKSDIDDRKAKADNSQLKSNLPPDDVISCPDPDFSNFDKIKTEDSFVENQFWAIYDDTDCMPRFYARIKKVHSPFKLEYTWLEPNPNHKDEIDWYDAGLPVACGKYKLGHSQKTKDCGMFSHQVHCIKGSARGSYLVYPMKGETWAIFKHWDIGWSSNPEKNSEYQFEYVEILSDFDEKDGIKVAYLSKLKGFVSLFQQTVQNGIGFFCIPSKELYRFSHRVPSFTMTGNEREDVPRGSFELDPAGLPMSVTKVEVGDPSVVKMKDGKLNKVVSSRQESSKRKVEQAKSNESIHKAKLRESNGTERVPPIFRRSPRSNAKSMDNGQASASQNMVREDDKNNSQRNYSQPEGSEADAVQTNENFKKPKKPEKRNYHGETLTVRRSARDLGKKNDVGGAGECVTGKLTDNHSNTSNNIKETVFSQSVGNDSARLKKDSGVVGACYDFNKEKSREMFQRGQIWAIYGDKDGIPDVYVQIKKIETTANFRLHVSELEPCSPPKGLKQTISCGSFKIKKAKLQILSPSAFSHQLKIEPMENSIYEIYPKKGEIWALYKDKNYELTSSNQGRGECHIVEVLADSDKSIQVVVLVRLNRSQPIFKAPIIRRSKTSIIEILREEVGRFSHQVPAFQPSGEDDVHLRGCWVVNPSSIPGFSYTWNEL 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04993 1048 MobiDBLite consensus disorder prediction 389 404 - -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 661 786 - -
Trre14g04993 1048 Gene3D DnaJ domain 52 143 IPR036869 -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 376 415 - -
Trre14g04993 1048 SUPERFAMILY Chaperone J-domain 61 130 IPR036869 -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 290 329 - -
Trre14g04993 1048 Pfam Domain of unknown function (DUF3444) 416 621 IPR024593 -
Trre14g04993 1048 Pfam Domain of unknown function (DUF3444) 832 1022 IPR024593 -
Trre14g04993 1048 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1039 - -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 750 783 - -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 707 726 - -
Trre14g04993 1048 CDD DnaJ 67 120 IPR001623 -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 219 257 - -
Trre14g04993 1048 SMART dnaj_3 66 123 IPR001623 -
Trre14g04993 1048 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 330 344 - -
Trre14g04993 1048 Pfam DnaJ domain 67 128 IPR001623 -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 271 361 - -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 661 692 - -
Trre14g04993 1048 PRINTS DnaJ domain signature 103 123 IPR001623 -
Trre14g04993 1048 PRINTS DnaJ domain signature 69 87 IPR001623 -
Trre14g04993 1048 PRINTS DnaJ domain signature 87 102 IPR001623 -
Trre14g04993 1048 MobiDBLite consensus disorder prediction 734 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04993 Trre-Chr14 56487439 56490585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04993 4 251 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.183 3.29e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04993 - - mtr:11432260 1536.16