Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04950 ATGGCGATCAAAACCATTTCACTCTCACTACTCCTCACTCTAATCCTTTTCTTCTCATTCACACTAACAAACTCCCCTCCATCCCTCTCAATCACAACAACAACAACTCCAATTCGCAGCAGATCACTCCTCACCATAACATCATCATCATCCTGCACCTCTCAATCCAACGGCATCCTCAACTACCACTGCATTTTCCCCCAAAATCCTTTCCTCTCAATCATATCTCTCTCCATCCTCCTCATCCTCCATTTCTACATCCTCATCAAAACCGCTTCTCACCATTTCTCAATCGTAACTACCAAACTCGCTTCTCACCTCAATCTCTCTCCTAGTATGGCCGCCGTCACACTTCTCGCTCTCGGTAACGGCTCTCCCGATGTTTTCTCATCTCTCGCCGCTCTTCGAGCCGGTCAATACCGTACTGGCTTCGGTGCTATTCTCTCCGCTGGAGCTTTTGTTTCTGCTCTTGTTGTCGGCTTTGTTGCGATCTACGCCGCTCCTTTTCCCGTTGATCCTGCGCCGTTTGTTAGGGATGTATTGTTTTATTTAACCGCTGCTATGTTTCTCTTTTACGTTTATCTTAGTGCTGAGATTTTTCTATGGCAAGCCGTTGGTTTCGTTGCGTTCTATCTCTTTTTTGTTGGTTTTGTGTTTTACATGGATTTGGGAATTGTGAATCGTAGTGAAAAGAGTTCTGCGGATCTTGAGGGACAAATTGAATCGTATTATGATGAAAAATTGCCGGGATCTGTTGAAAAAGATAAACACGCTTCTGGATTTTCTGGATCTTTTCGTTTGATTTCTAAAGCATGGGAGCTTCCTGTCTCAACTCTCCTAAGATTGACGATCCCTCAACCAGCACCATCGCAATGGAGCAGATTTTATGCATCAGCCAATATCGCTCTTTGTCCTCTAGCCCTCTTGTATGCATGCAACTCATTCGTGCCACTTGATCATCCCATAGTTTTCCTCCTCCCCAATACTCTTTTCCCTCTTTGGTCCGTAGTGCTCATGACAAGCTTCTCTCTTGCATTTCTTCATTTTGTATTGGAAAAAGAACCCCCCAAAGCAGAGCATTTGCCTGTGGTGGTTGTGGCATTTGTGATGAGTGTGTTTTGGATATCTACCACAGCTGGAGAGCTGGTGAATTGCCTCGAAGCCTTAGGTACGCTTCTCAAACTTCCAGCAGCATTCCTAGGTCTTACGGTGCTGGCATGGGGAAATTCAGTAGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCGGCAATGGCAATGGCTGGATGCTTTGCTGGACCGATGTTTAACATGCTTGTTGGTCTTGGATCTGCTTTGGTCATACAGACGACAAATACATATCCTAAAGCCTATGAACTTAATTTCCATGTTGGTATAGTGATTGCATTTGTGTTCCTTCTTTTAAGCCTCATGGGGTCTCTCTTGGTAATCACTTGGTCCCGATTCCGAGTGCCTAGGTTTTGGGGATTCTGTCTCGTGGGCCTCTATATTGTTTTTATGGCACTTTCTTCCCTTGAAACTCGGTTCCTGACTGAAGCTTTTTTTCATATACCTGAAGCTTTTTCCAGCAATTTCTGTCTGCCATTTCACTCTCCATGA 1629 0.4481 MAIKTISLSLLLTLILFFSFTLTNSPPSLSITTTTTPIRSRSLLTITSSSSCTSQSNGILNYHCIFPQNPFLSIISLSILLILHFYILIKTASHHFSIVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGIVNRSEKSSADLEGQIESYYDEKLPGSVEKDKHASGFSGSFRLISKAWELPVSTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFVPLDHPIVFLLPNTLFPLWSVVLMTSFSLAFLHFVLEKEPPKAEHLPVVVVAFVMSVFWISTTAGELVNCLEALGTLLKLPAAFLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTTNTYPKAYELNFHVGIVIAFVFLLLSLMGSLLVITWSRFRVPRFWGFCLVGLYIVFMALSSLETRFLTEAFFHIPEAFSSNFCLPFHSP 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04950 542 Pfam Sodium/calcium exchanger protein 78 219 IPR004837 GO:0016020|GO:0055085
Trre14g04950 542 Pfam Sodium/calcium exchanger protein 364 513 IPR004837 GO:0016020|GO:0055085
Trre14g04950 542 Gene3D - 297 514 IPR044880 -
Trre14g04950 542 Gene3D - 109 235 IPR044880 -
Trre14g04950 542 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 265 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04950 Trre-Chr14 56245413 56249508 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04950 11 513 Antiporters AT1G08960 68.501 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04950 K13754 - gmx:100775437 757.673