Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04944 ATGGCCGCCGTCACACTTCTCGCTCTCGGTAACGGCTCTCCCGATGTTTTCTCATCTCTCGCCGCTCTTCGAGCCGGTCAATACCGTACTGGCTTCGGTGCTATTCTCTCCGCTGGAGCTTTTGTTTCTGCTCTTGTTGTCGGCTTTGTTGCGATCTACGCCGCTCCTTTTCCCGTTGATCCTGCGCCGTTTGTTAGGGATGTATTGTTTTATTTAACCGCTGCTATGTTTCTCTTTTACGTTTATCTTAGTGCTGAGATTTTTCTATGGCAAGCCGTTGGTTTCGTTGCGTTCTATCTCTTTTTTGTTGGTTTTGTGTTTTACATGGATTTGGGAATTGTGAATCGTAGTGAAAAGAGTTCTGCGGATCTTGAGGGACAAATTGAATCGTATTATGATGAAAAATTGCCGGGATCTGTTGAAAAAGATAAACACGCTTCTGGATTTTCTGGATCTTTTCGTTTGATTTCTAAAGCATGGGAGCTTCCTGTCTCAACTCTCCTAAGATTGACGATCCCTCAACCAGCACCATCGCAATGGAGCAGATTTTATGCATCAGCCAATATCGCTCTTTGTCCTCTAGCCCTCTTGTATGCATGCAACTCATTCGTGCCACTTGATCATCCCATAGTTTTCCTCCTCCCCAATACTCTTTTCCCTCTTTGGTCCGTAGTGCTCATGACAAGCTTCTCTCTTGCATTTCTTCATTTTGTATTGGAAAAAGAACCCCCCAAAGCAGAGCATTTGCCTGTGGTGGTTGTGGCATTTGTGATGAGTGTGTTTTGGATATCTACCACAGCTGGAGAGCTGGTGAATTGCCTCGAAGCCTTAGGTACGCTTCTCAAACTTCCAGCAGCATTCCTAGGTCTTACGGTGCTGGCATGGGGAAATTCAGTAGGGGATCTTGTTGCTGATGTTGCAGTTGCTAAAGCTGGTCATCCGGCAATGGCAATGGCTGGATGCTTTGCTGGACCGATGTTTAACATGCTTGTTGGTCTTGGATCTGCTTTGGTCATACAGACGACAAATACATATCCTAAAGCCTATGAACTTAATTTCCATGTTGGTATAGTGATTGCATTTGTGTTCCTTCTTTTAAGCCTCATGGGGTCTCTCTTGATTAAGCTTTTTCCAGCAATTTCTGTCTGCCATTTCACTCTCCATGAAGGCGTGAAGGTCATTTCCTGCTGGTCTTTTCACACACTCAGGTATTATAGTCTTGATGCTTACTATGAGCGTCAAATGGAAAAAGAGATGAAAAGTGGTTTCAGTTCAAGAAGGTCCAGGCAACAGAATGAACTGTTCTCAGTGATGAAAAGCAATGCAGATAACAAGTATTGTCTCTGA 1347 0.4425 MAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGIVNRSEKSSADLEGQIESYYDEKLPGSVEKDKHASGFSGSFRLISKAWELPVSTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFVPLDHPIVFLLPNTLFPLWSVVLMTSFSLAFLHFVLEKEPPKAEHLPVVVVAFVMSVFWISTTAGELVNCLEALGTLLKLPAAFLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTTNTYPKAYELNFHVGIVIAFVFLLLSLMGSLLIKLFPAISVCHFTLHEGVKVISCWSFHTLRYYSLDAYYERQMEKEMKSGFSSRRSRQQNELFSVMKSNADNKYCL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04944 448 Pfam Sodium/calcium exchanger protein 2 107 IPR004837 GO:0016020|GO:0055085
Trre14g04944 448 Pfam Sodium/calcium exchanger protein 252 376 IPR004837 GO:0016020|GO:0055085
Trre14g04944 448 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 153 375 - -
Trre14g04944 448 Gene3D - 1 123 IPR044880 -
Trre14g04944 448 Gene3D - 185 402 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04944 Trre-Chr14 56227258 56232733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04944 1 363 Antiporters AT1G08960 73.784 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04944 K13754 - gmx:100775437 622.083