Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04937 ATGCCGTACGGATCTAACCCATATCAGTCAGACCAAATAAATGGGGCCCCTGGAACAGTTGTTACGTCAGCCGGGAGCATGCAATCCACTGGTCAACCTGCTGGAGCTCAGCATCAACTTGCTTATCAGCATATTCATCAGCAGCTTCAGCAACAGCTGCAATCTTTCTGGGAAAATCAGTGCCAAGAAATTGAAAATGTTACTGATATCAAGAACCACAGCCTTCCCCTGGCAAGAATTAAGAAGATCATGAAGGCCGACAAGGATGCGAGAATGATATCTGGTGAGGCACCGGTCTTATTTGCAAAGGCATGTGAAATGTTCATATCAGAGTTAACTATGCGTTCCTGGAACCACACTGAAGAGAAAAAAAGGAGGACACTTCAGAAGAGTGATATTGCTGCCGCAATCGCAAGGACTGATATCTTTGATTTCCTGGTTGACATTGTTCCCCGTGATGACGAAGTGCTGGCATCGATCCCAAGGGGAACAATGTCTGTTGGTGGGCCTTCTGATGCTCTTCCATACTGCTACATGCCCCCCCCCAGCATGCTCCTCATCCCTTCATGGCACCACAAATGTGGCCACAGCCTTCAGACCAGCAACCACCATCTCCAGATCACTAGATGCTGCTTTGTGGATGTTAAGATTGCGGCGAACTGTAATGTGGTGGGGGGTGTGAGACTTTGA 690 0.4812 MPYGSNPYQSDQINGAPGTVVTSAGSMQSTGQPAGAQHQLAYQHIHQQLQQQLQSFWENQCQEIENVTDIKNHSLPLARIKKIMKADKDARMISGEAPVLFAKACEMFISELTMRSWNHTEEKKRRTLQKSDIAAAIARTDIFDFLVDIVPRDDEVLASIPRGTMSVGGPSDALPYCYMPPPSMLLIPSWHHKCGHSLQTSNHHLQITRCCFVDVKIAANCNVVGGVRL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04937 229 Gene3D Histone, subunit A 36 152 IPR009072 GO:0046982
Trre14g04937 229 SUPERFAMILY Histone-fold 45 146 IPR009072 GO:0046982
Trre14g04937 229 FunFam Nuclear transcription factor Y subunit gamma 41 152 - -
Trre14g04937 229 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 39 158 - -
Trre14g04937 229 MobiDBLite consensus disorder prediction 1 35 - -
Trre14g04937 229 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 74 137 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04937 Trre-Chr14 56201538 56202440 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04937 1 180 CCAAT-HAP5 Transcription Factor Family AT1G08970 61.702 5.72e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Trre14g04937 CBFD_NFYB_HMF 2.7e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04937 K08066 - gmx:100782754 268.47