Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04924 ATGTTATTAGATAATTCATCAGAGCAATTGAAGGAAACCTCTGAAAACATGGATGAAAATACTTTGTCCAGTGGTCAGGGTGATACTCTCCCAATATTGAAGAAAATTATTGACCTAAGTACCAAAGCTCAGACCTTGAAGAGAGAACATGTTTCTCTTAGTGATCAAGTGAAACTCACATTTGAGTCCTTTCCTGGTCTGGATGTTTTAAAGTCTGTTCAGCTTCTGGAGCAATTGAACAAAACCTCTGAAAACATGGATGAGAATACTTCGTCCAGCGAAATCCATGAAATTTCTCCTCAACAGGATCATACTCTCCCAATACTAAAGAAAATTATTGACCTTAGTACTAAAGCTCAGACCTTGAAGAGAGAACATGTTTCCCTTAGTGATCAAGTGAAACTCACATTTGAATCCTTTCCTGGTCTGGATGTTTTAAAGTCTGTTCAGCTTCTGGGTGCTGAATATGAAATTTTGAAAAGAAAGTACCTAGAGGAGTCACTTGAGCGTAGGCGGCTTAACAATGAAGTGATAGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGACCGTTAAATGAAAATGAAATTGCTGATGGATCAGCGGTATCTGTTGTCAATTTTGAGTCAGCTTCTGAGGAACTTCAAGTTATTTGCTCAGATTCTTCTAAAAAGCAATTTAAATTTGATCATGTCTTCAAACCTGAAGATAATCAAGAGGCTGTTTTTGAACAAACAAAACCTATTGTTGCTTCAGTTTTAGATGGATATAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGCAAAACTTTTACCATGGAGGGAACACCAGAACATCGTGGAGTTAACTATAGAACCCTTGAGGAATTATTTCGGATTTCTGAAAATAGACAAGGCACGATGAAATATGAATTGCATGTTAGTATGCTGGAGGTTTACAATGAAAAGATAAATGATCTCTTGGCTGGAAATCCTTCTGAAGCCACTAAGAAGTTGGAAGTAAAGCAGGCTGCGGATGGGACCCAAGAAGTCCCAGGACTTGTTGAAACTCGTGTTTATGGAGCAGATGGTGTTTGGGAAATTCTGAAGTCTGGAAACAGAGTCAGATCAGTTGGCTCCACAAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGGTGCGGGTAACTGTTGTGGGAGAAAATTTAATCAATGGCCAGAGAACAAAAAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTAGGGAAAACTGATGCTGAAGGAGAAAGGCTGAAGGAATCCCAATTCATAAATAAGTCTCTATCAGCACTTGGTGATGTTATTGCAGCACTTGCTTCCAAATCAGCCCACATACCTTACAGGAACTCAAAGCTCACTCATATACTTCAGAGCTCGTTAGGAGGTGATTGCAAAACTCTAATGTTTGTCCAAATAAGTCCTAGTTCAGTGGACTTAACAGAGACGCTTTGCTCGCTGAATTTTGCCACGCGTGTTCGAGGAATTGAGAGTGGCCCAGCCCGTAAACAAGTAGACGTCACTGAGCTTATGAAGTACAAGCAAATGGCTGAAAAGTCCAAACACGATGAGAAGGAAGTTAGGAAATTACAAGATAACTTGCTGTCAGTACAAATGAAACTAACTGCAAGAGAACTCATGTGCCGAAATCTTCAAGACAAGGTTCGGAATCTAGAGAACCAGATTGCAGAGGAGAGAAAAGCCAGATTAAACCAAGAAAGTCGATCACTTGCTACCGAGAATACCAAAAAGAGGACGTCAATGATTCCTTTGGTAAGGCCCCCATTAAGAAGAATTAATAATTCCTTGCCTCCACCACCCGAGAGAAGGCCCTCCTCATGCAACTCTTCCTTAATTGGAAAGGAAAACATTGCAAGAACGACCTCAATGACTACAAGAAGAAGGGTGTCCGTTGCTACAAAACCACCAGCTGCACCGTCACAAACACAACCCCTTCAACCTAGGAGGCGTGTTTCCCTGGCAACATTTCATCCTGAAACAACTTCTGATGCCACAACTTCACTCCATACCTCTGCTTCTCAATTCATTAGTGGAAGCAATGTTCACCAATCAATGATACGGAGGAACAATAGGAAAGCTCGGTATTCAAGTTTGTTCACCCCGACAACATCAACAATCGAGACAACACCCTCTTTGGATAAGAGCCGCAGTAGGTTTGCTGGCAGTCCAACACAGGCAGCAGATTCACGGATGATGGCTAGACATCCACACCCAACTGTGATTGGACTGCAACGCAAACCTTTGGTATGGAGTCCTCTCAAGTGGAGAAGAGGCGTAGAAAGTAGCAGAAAGTCATCAATCTTGCCATCTCGGCCTTCCACCCCAATGCGATGGAGTCCTCTCAAGTGGAGAAGAGGCGTAGAAAGTAGCAGAAAGTCATCAATCTTGCCATCTCGGCCTTCCACCCAAATGTGA 2469 0.4208 MLLDNSSEQLKETSENMDENTLSSGQGDTLPILKKIIDLSTKAQTLKREHVSLSDQVKLTFESFPGLDVLKSVQLLEQLNKTSENMDENTSSSEIHEISPQQDHTLPILKKIIDLSTKAQTLKREHVSLSDQVKLTFESFPGLDVLKSVQLLGAEYEILKRKYLEESLERRRLNNEVIELKGNIRVFCRCRPLNENEIADGSAVSVVNFESASEELQVICSDSSKKQFKFDHVFKPEDNQEAVFEQTKPIVASVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRISENRQGTMKYELHVSMLEVYNEKINDLLAGNPSEATKKLEVKQAADGTQEVPGLVETRVYGADGVWEILKSGNRVRSVGSTSANELSSRSHCLVRVTVVGENLINGQRTKSHLWLVDLAGSERVGKTDAEGERLKESQFINKSLSALGDVIAALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDVTELMKYKQMAEKSKHDEKEVRKLQDNLLSVQMKLTARELMCRNLQDKVRNLENQIAEERKARLNQESRSLATENTKKRTSMIPLVRPPLRRINNSLPPPPERRPSSCNSSLIGKENIARTTSMTTRRRVSVATKPPAAPSQTQPLQPRRRVSLATFHPETTSDATTSLHTSASQFISGSNVHQSMIRRNNRKARYSSLFTPTTSTIETTPSLDKSRSRFAGSPTQAADSRMMARHPHPTVIGLQRKPLVWSPLKWRRGVESSRKSSILPSRPSTPMRWSPLKWRRGVESSRKSSILPSRPSTQM 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04924 822 MobiDBLite consensus disorder prediction 623 668 - -
Trre14g04924 822 PRINTS Kinesin heavy chain signature 377 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04924 822 PRINTS Kinesin heavy chain signature 257 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04924 822 PRINTS Kinesin heavy chain signature 408 426 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04924 822 PRINTS Kinesin heavy chain signature 457 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04924 822 SMART kinesin_4 181 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04924 822 Coils Coil 524 544 - -
Trre14g04924 822 Coils Coil 156 176 - -
Trre14g04924 822 Coils Coil 552 591 - -
Trre14g04924 822 Pfam Kinesin motor domain 189 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04924 822 FunFam Kinesin-like protein 178 547 - -
Trre14g04924 822 PANTHER KINESIN-LIKE PROTEIN KLP-3 20 657 IPR027640 GO:0003777|GO:0007018
Trre14g04924 822 MobiDBLite consensus disorder prediction 1 26 - -
Trre14g04924 822 MobiDBLite consensus disorder prediction 722 750 - -
Trre14g04924 822 MobiDBLite consensus disorder prediction 607 668 - -
Trre14g04924 822 ProSiteProfiles Kinesin motor domain profile. 183 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04924 822 ProSitePatterns Kinesin motor domain signature. 407 418 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre14g04924 822 MobiDBLite consensus disorder prediction 722 742 - -
Trre14g04924 822 Gene3D Kinesin motor domain 178 549 IPR036961 -
Trre14g04924 822 MobiDBLite consensus disorder prediction 779 822 - -
Trre14g04924 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 542 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04924 Trre-Chr14 56141836 56145835 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04924 154 528 Calmodulin-binding Proteins AT5G65930 42.553 2.10e-78 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04924 K10406 - gmx:100788477 948.347