Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04921 ATGGAAGATCGCGTAATTGATATGCTTACAGAAAAATTCAACCGATTCGTCATTCACACTAATTTCAACTCCGAACCAGATAATTCATCGGAGCAATTGAACGAAACCTCTGAAAACATGGATGAGAATACTTCGTCCAGCGAAGTACATGAAATTTCTCCTCAACAGGATCATACTCTACCAATACTAAAGAAAATTATTGACCTTAGTACCAAAGCTCAGACCTTGAAGAGAGAACATGTTTCACTTAGTGATCAAGTGAAACTCACATTTGAGTCCTTTCCTGGTCTGGATGTTTTAAAGTCTGTTCGGCTTTTGGGTGCTGAATATGAAATTTTGAAAAGAAAGTACCTAGAGGAGTCACATGAGCGTAGGCGGCTCAACAATGAAGTGATAGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGACCGTTAAATGAAAATGAAATTGCTAATGGATCAGCGGTATCTGTTGTCAATTTTGAGTCAGCTTCTGAGGAGCTTCAAGTTATTTGCTCAGATTCTTCAAAAAAGCAATTTAAATTTGATCATGTATTCAAACCTGAAGATAATCAAGAGGCTGTTTTTGCACAAACAAAACCGATTGTTGCTTCTGTTTTAGATGGATATAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGTAAGACTTTTACCATGGAGGGAACACCAGAGCATCGTGGAGTTAACTATAGAACCCTTGAGGAATTATTTCGGATTTCTGAAAATAGACAAGGCACGATGAAATATGAATTGCATGTTAGTATGCTGGAAGTTTACAATGAAAAGATAAAAGATCTCTTGGCCGGAAGTCCTTCTGAAGCCACTAAGAAGTTGGAAGTAAAGCAAGCTGCAGATGGAACCCAAGAAGTCCCAGGACTTGTTGAAACTCGTGTTTATGGAGCAGATGGTGTTTGGGAAATTCTGAAGTCTGGAAACAGAGTCAGATCAGTTGGTTCCACAAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGGTGCGGGTAACTGCTGTGGGGGAGAATTTAATCAATGGCCAGAGAACAAAAAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTAGGGAAAACTGATGCTGAAGGAGAAAGGCTGAAGGAATCTCAATTCATAAATAAGTCTCTATCGGCACTTGGTGATGTTATTGCAGCACTTGCTTCCAAATCAGCCCACATACCTTACAGGAACTCAAAGCTCACTCATATACTTCAGAGCTCGTTAGGAGGTGATTGCAAAACTCTAATGTTTGTCCAAATAAGTCCTAGTTCGGTGGACTTAACAGAGACGCTTTGCTCGCTGAATTTTGCCACGCGTGTTCGAGGAATTGAGAGCGGCCCAGCCCGCAAACAAGTAGACCTCGCTGAGCTTATGAAGTACAAGCAATTGGCTGAAAAGTCCAAACACGATGAGAAGGAAGTTAGGAAATTACAAGATAACTTGCAGTCAGTGCAAATGAAATTAACCGCAAGAGAACTCATGTGCCGAAATCTTCAAGACAAGGTTCGGAATCTAGAGAACCAGATTGCAGAGGAGAGAAAAGCCAGATTAAACCAAGAAAGTAGATCACTTGCTACCGAGAATACCAAAAAGAGGACATCAATGATTCCTTTGGCAAGACCCCCATTAAGAAGAATTAATAATTCTTTGCCTCCACCACCCGAGAGAAGGCCCTCCTCATGCAACTCTTCCTTAATTGGAAAGGAAAACATTGCCAGAACGACCTCAATGACTACAAGAAGAAGGGTGTCCGTTGCTACAAAACCACCAGCTGCACCGTCACAAACACAACCCCTTCAACCTAGGAGGCGAGTTTCCCTGGCAACATTTCATCCTGAAACAACTTCTGATGCCACAACTTCACTCCATACCTCTGCTTCTCAATTCATTAGTGGAAGCAATGTTCACCAATCAATGATAAGGAGGAACAATAGGAAAGCTCGGTATTCAAGTTTGTTCACCCCGACAACATCAGCAATTGAGACAACGCCCACTTTGGATAAGAGACGCAGTAGGTTTGCTGGCAGTCCAATACAGGCAGCAGATTCACCGATGATGGTTAGACATCCACACCCAACTGTGATTGCACTGCAACGCAAACCTTTGGTATGGAGTCCTCTCAAGTGGAGAAGAGGCGTTGAAAGTAGCAGAAAGTCATCAATCTTGCCATCTCGGCCTTCCACCCAAATGTGA 2247 0.4219 MEDRVIDMLTEKFNRFVIHTNFNSEPDNSSEQLNETSENMDENTSSSEVHEISPQQDHTLPILKKIIDLSTKAQTLKREHVSLSDQVKLTFESFPGLDVLKSVRLLGAEYEILKRKYLEESHERRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSVVNFESASEELQVICSDSSKKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRISENRQGTMKYELHVSMLEVYNEKIKDLLAGSPSEATKKLEVKQAADGTQEVPGLVETRVYGADGVWEILKSGNRVRSVGSTSANELSSRSHCLVRVTAVGENLINGQRTKSHLWLVDLAGSERVGKTDAEGERLKESQFINKSLSALGDVIAALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDLAELMKYKQLAEKSKHDEKEVRKLQDNLQSVQMKLTARELMCRNLQDKVRNLENQIAEERKARLNQESRSLATENTKKRTSMIPLARPPLRRINNSLPPPPERRPSSCNSSLIGKENIARTTSMTTRRRVSVATKPPAAPSQTQPLQPRRRVSLATFHPETTSDATTSLHTSASQFISGSNVHQSMIRRNNRKARYSSLFTPTTSAIETTPTLDKRRSRFAGSPIQAADSPMMVRHPHPTVIALQRKPLVWSPLKWRRGVESSRKSSILPSRPSTQM 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04921 748 Gene3D Kinesin motor domain 132 504 IPR036961 -
Trre14g04921 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 495 IPR027417 -
Trre14g04921 748 PANTHER KINESIN-LIKE PROTEIN KLP-3 31 607 IPR027640 GO:0003777|GO:0007018
Trre14g04921 748 Pfam Kinesin motor domain 143 461 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04921 748 MobiDBLite consensus disorder prediction 23 53 - -
Trre14g04921 748 FunFam Kinesin-like protein 132 501 - -
Trre14g04921 748 PRINTS Kinesin heavy chain signature 362 380 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04921 748 PRINTS Kinesin heavy chain signature 411 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04921 748 PRINTS Kinesin heavy chain signature 211 232 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04921 748 PRINTS Kinesin heavy chain signature 331 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04921 748 Coils Coil 478 545 - -
Trre14g04921 748 ProSiteProfiles Kinesin motor domain profile. 137 461 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04921 748 MobiDBLite consensus disorder prediction 577 622 - -
Trre14g04921 748 MobiDBLite consensus disorder prediction 560 622 - -
Trre14g04921 748 Coils Coil 110 130 - -
Trre14g04921 748 ProSitePatterns Kinesin motor domain signature. 361 372 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre14g04921 748 SMART kinesin_4 135 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04921 Trre-Chr14 56130428 56134478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04921 108 482 Calmodulin-binding Proteins AT5G65930 42.553 4.85e-77 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04921 K10406 - gmx:100788477 972.615