Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre14g04918 | ATGCAAGACATTTTCGGATCAGTTCGCCGGTCACTAGTTTTCCGACCATCACCGGAGACCACCGAAGATCATTCACTCGGAGGAACAACCCTAGTTGACAAGATCGGTTACTGTATTCGTAATTCTAGAGTTTTCTCTAAACCTTCTCCGCCGTCTCCTCCTATTCCTAAAGAAACTGTTCCTCAAATCCGATGGCGAAAAGGCGAGTTAATCGGTTGTGGTGCTTTTGGTCAAGTTTATGTTGGAATGAATCTCGATTCTGGAGAGCTTCTTGCTGTTAAACAGGTTTTGATTGCAGCAAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCATGTAAAAGAGCTTGAGGAAGAAGTTAAACTGCTTAAGGATCTTTCGCATCCCAACATTGTTAGATATTTGGGTACGGTTAGAGAAGAAGATACCTTAAATATTCTCCTTGAGTTTGTTCCTGGTGGATCCATATCTTCACTGTTGGGGAAGTTTGGAGCCTTTCCTGAGGCCGTCATAAGAACTTACACGAAGCAGATATTGCTTGGACTCGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATCAAGGGGGCCAATATTCTTGTAGATAATAAAGGATGCATAAAAGTAGCAGATTTTGGAGCATCCAAACAGGTCGTTGAGCTGGCTACCATTTCTGGTGCCAAGTCCATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACCGGGCATAGCTTCTCTGCTGACATATGGAGCGTGGGTTGTACAGTGATTGAGATGGCCACGGGAAAGCCTCCTTGGAGCCAGCAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCACCCACCAATTCCTGATCATCTTTCTGCTGGAGCGAAAGATTTTCTGCTAAAGTGCTTGCAGAAGGAACCAAATTTGAGGCTATCAGCATCGGAACTGCTGCAGCATCCCTTTGTTACTGGTGAAAATATGGATTTGATTTCTCAGTCATCTACTGCCATGGGAAGTTTTAGAGCATCTTCACCATCATGTGCTCCAAATGTTGAATCCTTACTTTGCTCTACAGAAAATCCTCTGGACTCAGGAAATAATCATTTATGGGGAATGAACAATGATGATGACATGTGTGTGATTGATGACAAAGAAGAGTTCTCAGAGTGTAATGTCAAATACAAATCATTGATGCCCGATAATATTGAGAGTTTCAACCCTATGTCTGAACCTTTGGATGATTGGGGCTGTAAATTTGACGCAAGTCCAGAACTGGTAAATAGAGAAGTTAGTTTGGACACTGATGAAAGTCGCATGTCAAGTGTTCAATTAGAGTCTAATAAGGAACAGAAAGATTTATCCTTTCCATGTGTGCCATCTCTATCAGAAGACGATGATGAGCAAACAGAGGTCAAAATTAAAGCTTTTTTGGATGAAAAGGCTCTTGAACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTTTTCAACAATTTAAATACATCTTGTTCACCCAATGTGATTGATAGTCCAAGTGATGATAACGCCGCTCGAAAATACTTGAAATTACCTCCTAAAAGCAAGTCACCAAGTCGGATGCCAATTAGCTCTCCATCTAAAGCAGTTGACAATGCTGGAAGTCCTGGAAGTAATGGCAGGTCCTCAGCAACTGTTGGAAATGTAAATAGTCATGGTTCACAGGATGTTCCAGCATCTCCCGTAAATGAACGGAAAGGAATGGTAGTTGACTCCCAGCAGGAACACTTTAGCCCAAGTTTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAGAGAAAACGAGAAATGATGCGCCAAGCTAATATGACAGGAAAGACATCTTCACCAAAGGATCGAGCTTTAAATCGACAGAGAGAAAGGACAAGATTTGCTTCTCCCAGCTAA | 1962 | 0.4256 | MQDIFGSVRRSLVFRPSPETTEDHSLGGTTLVDKIGYCIRNSRVFSKPSPPSPPIPKETVPQIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQILLGLEYLHKNGIMHRDIKGANILVDNKGCIKVADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSAGAKDFLLKCLQKEPNLRLSASELLQHPFVTGENMDLISQSSTAMGSFRASSPSCAPNVESLLCSTENPLDSGNNHLWGMNNDDDMCVIDDKEEFSECNVKYKSLMPDNIESFNPMSEPLDDWGCKFDASPELVNREVSLDTDESRMSSVQLESNKEQKDLSFPCVPSLSEDDDEQTEVKIKAFLDEKALELKKLQTPLYEEFFNNLNTSCSPNVIDSPSDDNAARKYLKLPPKSKSPSRMPISSPSKAVDNAGSPGSNGRSSATVGNVNSHGSQDVPASPVNERKGMVVDSQQEHFSPSLSFSERQRKWKEELDQELERKREMMRQANMTGKTSSPKDRALNRQRERTRFASPS | 653 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre14g04918 | 653 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 57 | 334 | - | - | |
Trre14g04918 | 653 | FunFam | Serine/threonine-protein kinase STE11 | 61 | 155 | - | - | |
Trre14g04918 | 653 | CDD | STKc_MAPKKK | 64 | 328 | - | - | |
Trre14g04918 | 653 | MobiDBLite | consensus disorder prediction | 587 | 606 | - | - | |
Trre14g04918 | 653 | Pfam | Protein kinase domain | 66 | 328 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g04918 | 653 | MobiDBLite | consensus disorder prediction | 509 | 580 | - | - | |
Trre14g04918 | 653 | FunFam | Mitogen-activated protein kinase kinase kinase 2 | 64 | 356 | - | - | |
Trre14g04918 | 653 | SUPERFAMILY | Protein kinase-like (PK-like) | 64 | 355 | IPR011009 | - | |
Trre14g04918 | 653 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672|GO:0006468 | |
Trre14g04918 | 653 | Coils | Coil | 605 | 629 | - | - | |
Trre14g04918 | 653 | MobiDBLite | consensus disorder prediction | 617 | 653 | - | - | |
Trre14g04918 | 653 | ProSiteProfiles | Protein kinase domain profile. | 65 | 328 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g04918 | 653 | SMART | serkin_6 | 65 | 328 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre14g04918 | 653 | ProSitePatterns | Protein kinases ATP-binding region signature. | 71 | 94 | IPR017441 | GO:0005524 | |
Trre14g04918 | 653 | MobiDBLite | consensus disorder prediction | 536 | 576 | - | - | |
Trre14g04918 | 653 | Gene3D | Transferase(Phosphotransferase) domain 1 | 63 | 351 | - | - | |
Trre14g04918 | 653 | MobiDBLite | consensus disorder prediction | 438 | 468 | - | - | |
Trre14g04918 | 653 | Coils | Coil | 98 | 125 | - | - | |
Trre14g04918 | 653 | MobiDBLite | consensus disorder prediction | 442 | 456 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre14g04918 | Trre-Chr14 | 56121365 | 56126753 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre14g04918 | 1 | 652 | MAP Kinase Kinase Kinase | AT1G54960 | 57.183 | 0.0 | 683 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Trre14g04918 | Pkinase | 1.1e-72 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre14g04918 | K20606 | - | gmx:100807537 | 1033.09 |