Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04918 ATGCAAGACATTTTCGGATCAGTTCGCCGGTCACTAGTTTTCCGACCATCACCGGAGACCACCGAAGATCATTCACTCGGAGGAACAACCCTAGTTGACAAGATCGGTTACTGTATTCGTAATTCTAGAGTTTTCTCTAAACCTTCTCCGCCGTCTCCTCCTATTCCTAAAGAAACTGTTCCTCAAATCCGATGGCGAAAAGGCGAGTTAATCGGTTGTGGTGCTTTTGGTCAAGTTTATGTTGGAATGAATCTCGATTCTGGAGAGCTTCTTGCTGTTAAACAGGTTTTGATTGCAGCAAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCATGTAAAAGAGCTTGAGGAAGAAGTTAAACTGCTTAAGGATCTTTCGCATCCCAACATTGTTAGATATTTGGGTACGGTTAGAGAAGAAGATACCTTAAATATTCTCCTTGAGTTTGTTCCTGGTGGATCCATATCTTCACTGTTGGGGAAGTTTGGAGCCTTTCCTGAGGCCGTCATAAGAACTTACACGAAGCAGATATTGCTTGGACTCGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATCAAGGGGGCCAATATTCTTGTAGATAATAAAGGATGCATAAAAGTAGCAGATTTTGGAGCATCCAAACAGGTCGTTGAGCTGGCTACCATTTCTGGTGCCAAGTCCATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACCGGGCATAGCTTCTCTGCTGACATATGGAGCGTGGGTTGTACAGTGATTGAGATGGCCACGGGAAAGCCTCCTTGGAGCCAGCAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCACCCACCAATTCCTGATCATCTTTCTGCTGGAGCGAAAGATTTTCTGCTAAAGTGCTTGCAGAAGGAACCAAATTTGAGGCTATCAGCATCGGAACTGCTGCAGCATCCCTTTGTTACTGGTGAAAATATGGATTTGATTTCTCAGTCATCTACTGCCATGGGAAGTTTTAGAGCATCTTCACCATCATGTGCTCCAAATGTTGAATCCTTACTTTGCTCTACAGAAAATCCTCTGGACTCAGGAAATAATCATTTATGGGGAATGAACAATGATGATGACATGTGTGTGATTGATGACAAAGAAGAGTTCTCAGAGTGTAATGTCAAATACAAATCATTGATGCCCGATAATATTGAGAGTTTCAACCCTATGTCTGAACCTTTGGATGATTGGGGCTGTAAATTTGACGCAAGTCCAGAACTGGTAAATAGAGAAGTTAGTTTGGACACTGATGAAAGTCGCATGTCAAGTGTTCAATTAGAGTCTAATAAGGAACAGAAAGATTTATCCTTTCCATGTGTGCCATCTCTATCAGAAGACGATGATGAGCAAACAGAGGTCAAAATTAAAGCTTTTTTGGATGAAAAGGCTCTTGAACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTTTTCAACAATTTAAATACATCTTGTTCACCCAATGTGATTGATAGTCCAAGTGATGATAACGCCGCTCGAAAATACTTGAAATTACCTCCTAAAAGCAAGTCACCAAGTCGGATGCCAATTAGCTCTCCATCTAAAGCAGTTGACAATGCTGGAAGTCCTGGAAGTAATGGCAGGTCCTCAGCAACTGTTGGAAATGTAAATAGTCATGGTTCACAGGATGTTCCAGCATCTCCCGTAAATGAACGGAAAGGAATGGTAGTTGACTCCCAGCAGGAACACTTTAGCCCAAGTTTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAGAGAAAACGAGAAATGATGCGCCAAGCTAATATGACAGGAAAGACATCTTCACCAAAGGATCGAGCTTTAAATCGACAGAGAGAAAGGACAAGATTTGCTTCTCCCAGCTAA 1962 0.4256 MQDIFGSVRRSLVFRPSPETTEDHSLGGTTLVDKIGYCIRNSRVFSKPSPPSPPIPKETVPQIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQILLGLEYLHKNGIMHRDIKGANILVDNKGCIKVADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSAGAKDFLLKCLQKEPNLRLSASELLQHPFVTGENMDLISQSSTAMGSFRASSPSCAPNVESLLCSTENPLDSGNNHLWGMNNDDDMCVIDDKEEFSECNVKYKSLMPDNIESFNPMSEPLDDWGCKFDASPELVNREVSLDTDESRMSSVQLESNKEQKDLSFPCVPSLSEDDDEQTEVKIKAFLDEKALELKKLQTPLYEEFFNNLNTSCSPNVIDSPSDDNAARKYLKLPPKSKSPSRMPISSPSKAVDNAGSPGSNGRSSATVGNVNSHGSQDVPASPVNERKGMVVDSQQEHFSPSLSFSERQRKWKEELDQELERKREMMRQANMTGKTSSPKDRALNRQRERTRFASPS 653
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04918 653 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 57 334 - -
Trre14g04918 653 FunFam Serine/threonine-protein kinase STE11 61 155 - -
Trre14g04918 653 CDD STKc_MAPKKK 64 328 - -
Trre14g04918 653 MobiDBLite consensus disorder prediction 587 606 - -
Trre14g04918 653 Pfam Protein kinase domain 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04918 653 MobiDBLite consensus disorder prediction 509 580 - -
Trre14g04918 653 FunFam Mitogen-activated protein kinase kinase kinase 2 64 356 - -
Trre14g04918 653 SUPERFAMILY Protein kinase-like (PK-like) 64 355 IPR011009 -
Trre14g04918 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Trre14g04918 653 Coils Coil 605 629 - -
Trre14g04918 653 MobiDBLite consensus disorder prediction 617 653 - -
Trre14g04918 653 ProSiteProfiles Protein kinase domain profile. 65 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04918 653 SMART serkin_6 65 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04918 653 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Trre14g04918 653 MobiDBLite consensus disorder prediction 536 576 - -
Trre14g04918 653 Gene3D Transferase(Phosphotransferase) domain 1 63 351 - -
Trre14g04918 653 MobiDBLite consensus disorder prediction 438 468 - -
Trre14g04918 653 Coils Coil 98 125 - -
Trre14g04918 653 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre14g04918 Trre-Chr14 56121365 56126753 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04918 1 652 MAP Kinase Kinase Kinase AT1G54960 57.183 0.0 683
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre14g04918 Pkinase 1.1e-72 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04918 K20606 - gmx:100807537 1033.09