Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04917 ATGGGTGTAACTGAAGCAAACAAGCAATACAGGTCTGCGAAAGTATCTGTGTGGTGGGATTGTGAAAACTGGGATGATTACATGAATCTTGATCCTCGTCAAATTAAAGATAACATCCGTTTAGCACTTGATCGGGTGGGATACAAGGGATCCGTTTCGATCTTTTGCTACGTTGACGAAGCAACTCAAATTCCTCAACATGCGCACACGTCTTTCTCTTTAGGAGGAATTTCCATCAGACAATATCCTCGAGGTACGAAACTTGCTATGATCTTGGTCCATACCGTGATGTGGGGAGATAACAACCCTCCACCTGCAAATTACTTATTTATTTCGGATGATTTCAAATTTACTGGTATTATCAAACATCGAGCACTCTGCGATTATCAAATTCTTCTTGCACTATCGCCAAACGCACCGGAAATCTTTGTATCTGACCCCAAGGTCGTATGGCTTTTGCCTAGTCTCTTTTCTGGAGGATCTCCAATATCTAAGAAAAAATGGCTACAACTTGGGGGTTACTGGTCTGATGATGATGAAATTATAACAGGTTCTGATGATGATGATGATGAAATTATAACAGGTTCTGATGATGATGATGATGATGTTTAA 612 0.4036 MGVTEANKQYRSAKVSVWWDCENWDDYMNLDPRQIKDNIRLALDRVGYKGSVSIFCYVDEATQIPQHAHTSFSLGGISIRQYPRGTKLAMILVHTVMWGDNNPPPANYLFISDDFKFTGIIKHRALCDYQILLALSPNAPEIFVSDPKVVWLLPSLFSGGSPISKKKWLQLGGYWSDDDEIITGSDDDDDEIITGSDDDDDDV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04917 203 CDD PIN_limkain_b1_N_like 14 134 - -
Trre14g04917 203 Pfam NYN domain 14 123 IPR021139 GO:0004540
Trre14g04917 203 PANTHER LIMKAIN B LKAP 8 157 IPR024768 GO:0005777|GO:0010468
Trre14g04917 203 MobiDBLite consensus disorder prediction 180 203 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04917 3 164 C2H2 Transcription Factor Family AT5G61190 36.970 1.92e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04917 - - pda:103707687 123.635