Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04854 ATGGGGCATTTTTCTTCTATGTTCAATGGTTTGGCAAGATCATTTTCACTAAAGAAAGGAAGAAATTCTGTGAGATGTGAAAGGAGAGAAGCTGTTGAAGAAATGGCTAAAGAAGCTAAGAAAAATGATTTGATTTTGTGTAGCTCTGGCACTGTTAATGTTGATGGTTCAAATAATTTTGCCTCAGTTTTCTCCAAAAGAGGCCAGAAAGGAACCAACCAAGATTGTTGCATAGTATGGGAGGAATTTGGATGCCAAGAGGACATGATATTTTGTGGGATATTTGATGGACATGGTCCATGGGGTCACTTTGTAGCCAAAAGAGTAAGAGAGTCAATGCCAAGGTCTTTGCTATGCAATTGGCAAGAAACACTTGCTGCACAATCTTCATCACTTGATGATAATGTAAAAGATATTGATCAAGTAAAAGCAGCTGCAGACAACAAACAACAAAGATTCAATATATGGAAACACTCTTACTTGAAAACTTGCGCTTCCATCGATCAAGAACTTGAGCATTGTCGAAAATTTGACTCGTTTTACAGTGGAACAACTGCTCTCTCAATTGTTAGACAGGGTGAAACGGTTATCATAGCAAATGTTGGCGATTCTCGTGCAGTATTAGCTACAACTTCGGACGATGGAAGTTTAGTAGCAGTTCAACTAACAGTTGATTTCAAGCCAAATTTACCTCAAGAGGAAGAGAGAATAATTCAGTGTCAAGGGCGTGTGTTCTGTTTAGAAGATGAACCTGGTGTGCATAGGGTATGGTTACCAGATGTAGAGTCACCAGGACTTGCCATGTCAAGGGCTTTTGGTGATTACTGTATTAAACAATATGGTCTTATTTCAGTGCCTGAGGTAACTCAAAGGAATATAAGCAGTAAAGATCAGTTTGTTGTGCTTGCTTCTGATGGGGTTTGGGATGTGATCTCCAATCAAGAAGCAGTAGATATTATATCTTCAACACCAGATAAAGCAAAATCAGCTAAACGTTTGGTGCAATGTGCAGTGCATGCATGGAAACGCAAGAGGAGGGGTATTGCCACTGATGATATTTCAGCAATTTGTCTCTTTTTTCACTCTTCTTCTGTTTCCTCTGAGCAAGTTAGCCCAATTGACACGGTTAAATAG 1134 0.3933 MGHFSSMFNGLARSFSLKKGRNSVRCERREAVEEMAKEAKKNDLILCSSGTVNVDGSNNFASVFSKRGQKGTNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPRSLLCNWQETLAAQSSSLDDNVKDIDQVKAAADNKQQRFNIWKHSYLKTCASIDQELEHCRKFDSFYSGTTALSIVRQGETVIIANVGDSRAVLATTSDDGSLVAVQLTVDFKPNLPQEEERIIQCQGRVFCLEDEPGVHRVWLPDVESPGLAMSRAFGDYCIKQYGLISVPEVTQRNISSKDQFVVLASDGVWDVISNQEAVDIISSTPDKAKSAKRLVQCAVHAWKRKRRGIATDDISAICLFFHSSSVSSEQVSPIDTVK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04854 377 PANTHER PROTEIN PHOSPHATASE 41 358 IPR015655 GO:0004722|GO:0006470
Trre14g04854 377 Gene3D - 46 363 IPR036457 -
Trre14g04854 377 ProSiteProfiles PPM-type phosphatase domain profile. 60 360 IPR001932 -
Trre14g04854 377 CDD PP2Cc 59 360 IPR001932 -
Trre14g04854 377 FunFam Probable protein phosphatase 2C 34 51 362 - -
Trre14g04854 377 SUPERFAMILY PP2C-like 55 361 IPR036457 -
Trre14g04854 377 Pfam Protein phosphatase 2C 66 334 IPR001932 -
Trre14g04854 377 SMART PP2C_4 51 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04854 Trre-Chr14 55672608 55675138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04854 1 361 PP2C-type Phosphatase Gene Family AT3G05640 73.003 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04854 - - gmx:100801309 618.231