Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04847 ATGTCAAACGACCAAGTTTTATCATTCTCTGTTGTTTCTGTCGTCGAAGATGTTATTATTCAACAACAACAACAACAACAACAGGGTGCCCGGTCCAGTGATTACAAATTTGTCTCCAGAAAAACCGAAGAAGCTTCTTTGAGAAGGTATGAAGCGGCCGGTTGGTTGCGAAAAACGGTTGGAGTTGTTGGAGGGAAGGACTTACCAGCTGAACCTTCTGAAGAAGATTTTAGGATTGGTTTGCGTAGTGGGATTATTCTCTGCAATGCTCTCAACAAAATTCAACCTGGAGCAGTGGCTAAGGTGGTTGAAGGCCCTTGTGATTCTGTTCTTGTTCCTGATGGAGCAGCATTATCTGCTTTTCAATACTTTGAAAATCTAAGGAATTTTCTTGTAGCTGTTGAAGAAATGGGACTTCCTACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGAATAGTGAATTGTGTTTTAGCAATGAAATCATTTGCTGAAGGGACACTTGGAGGAAGAAGTGGATCAGGGTCATTCAAATTTGGTCAAAAGCCACCTACATCCGCGAAACCAATTTTGAGGAAAAACTCAGAACCATTCATGAAATCACTATGGAGTATGACATTAGGCGACAAAGATGGTTACACGAGTGATAACTCTTCATACAATGAATCTGGAAATGATCGCCATGAAGGGGGTTCGTTTTCTTCCTTAAATTCACTAGTTCGCCAATATTTGTTTAATAAGAGGCCAGAAGAAATTCCCATTGCAGTGGAGTCTCTACTTAACAAAGTCATGGAAGAGTTTGAGCGTCGGATGCAAATTCAGCAAGAAACGTTTAAAACAACTCAAGAAGATAAGCCATCGTCTGAAACGGAACAATCAATTTCAAAAGATGCTTCGGTTGATGAAGCGATCGAAGAAAATGAAGATGGAGAACAGTTGCAAGAAAAACAAGAGGAATGCGATGATGAGAAATACAATAGTGATGCCGAAGAATCAAGCAGACTGAATTTGAAGCAGCTAAGTATAGTCGAGGAACAAAATAGAAGTGTCCAGGAAGTGAAACACATTGTACATCAAACGAAATCGGGAATGCAGTTTCTGCAAAAGGAATACCACAAGGATATGATCAATCTAAGTAAGCACCTGCATAGTCTAGCTGCTGCTGCTTCGGGATATCATAAAGTTCTCGAAGAAAACCGCAAGTTATACAATCAAGTGCAGGACCTTAAAGGAAACATTAGGGTGTACTGTCGAGTTCGACCGTTCTTGGGAGGGAAATCAAATCAAAATAGCGTTGTCAGCAGCGTGGAGGAAGGAAGTATGGCAATCATGATACCTCCCAATTCCAAACTTGGTAAAGAAGGAAAGAAGACATTTAACTTCAATAAAGCTTTTGGTTCTACTTCAACACAAGCGGAAGTATTCTCGGATATGCAACCTCTGGTCCGTTCTGTTCTTGATGGTTACAATGTTTGTATTTTTGCATACGGCCAAACAGGTTCCGGAAAAACGTACACTATGGCAGGACCAGACAATCTTGATGAGGACACAATAGGTGTGAACTACCGTGCGTTGAAGGATCTCTTCTTTCTCTCGGATCAGAGGAAAGACACCATTAACTATGTAATCTCAGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTACTAGCTCCAGAGGAAATCCGCAATAGTTCCAATAATGGCATCAACGTGCCAGATGCGAACCTTGTTCCAGTTTCAACCACTTCCGATGTCATAAATTTGATGAACTTGGGACATAAAAATCGCGCTGTTGGTTCTACTTCCATGAACGAACGTAGCAGTCGTTCTCACAGTTGCTTGACAGTTCATGTTCATGGAAAGAACTTGGTATCAGGAAGCATTATTCGAGGTAGTATGCATCTTGTTGACCTTGCAGGAAGTGAGAGGGCCGATAAAACTGAGGCCACGGGAGATAGACTTAAAGAGGCTCAACATATCAACAAGTCACTTTCTGCCTTAGGGGATGTAATCGCTTCCCTTGCGCAGAAGAATGCACATGTTCCATATCGGAACAGTAAACTTACTCAGCTACTTCAGGATGCACTCGGAGGGCAGGCCAAAACTCTCATGTTTGTTCATATTAGTCCGGAACCTGATGCTCTTGGAGAAACACTAAGTACACTCAAGTTCGCAGAACGCGTATCCACCGTTGAACTAGGAGCTGCCAGAGTAAATAAAGATAACTCTGAAGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCAGCCTTAGCGAGGAAGGATGGAGAAGCAGAACAGTTTCAACAACCTACCAATAATGGTCATGTAATACCCAAGTTAAAATCGCATGCATCGTCACCTCCCATACAACAACGTAGTTCAACATCTTCTGGAGGCCGTAAGCAGCCAAAGGACGATTCTAGTAGCGTAATGGGTGAGAAAAAGGGTGCATCAAAGCTGAAAAGAAGAAGCCTAGATCTTCATGACATGTATAATAGGAGTTCACCACCATGGCCACATGTTAACAACAATCAAGGAGTAAATGGAAAAGAGGACGATAAGGAATCGGTTTCAGGAAGGATGAACAGAAATGACAGCTTCACAAGTGATGATAGCTTAGTGGGACAATGGGAAGCAGAAAGTAAACAATACTCTCCATTGTTAAGTCCAAGTTCTCTTTCAGAAAATTCAAAGTTATGTTCAGATCCCGGGTATGAGATGACTAATATGACCACAGATGAATCTGATGAGCTTGAAATTGCAACCAGTGATTCTTCAGAATCAGACATGAATTGGTTAATACAGGCACCTAAACCAACCTTACTTTCAAATGGATTAGGCTCTAAGTTAAAGAAACCTACTAATCCTAGACCAACAAAAATCCCAGAAGTCAGGAGTATGATTCCATCATTAATTCCTACTCCATCAAAGAAACAATCAATTCCAATTATTCAAGGAAGAAAGCATCCAGGATCAAGTGATGTAAAGAGGAGGAGTGGGAATGCAAAGTGA 3036 0.4134 MSNDQVLSFSVVSVVEDVIIQQQQQQQQGARSSDYKFVSRKTEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNALNKIQPGAVAKVVEGPCDSVLVPDGAALSAFQYFENLRNFLVAVEEMGLPTFEASDLEQGGKSSRIVNCVLAMKSFAEGTLGGRSGSGSFKFGQKPPTSAKPILRKNSEPFMKSLWSMTLGDKDGYTSDNSSYNESGNDRHEGGSFSSLNSLVRQYLFNKRPEEIPIAVESLLNKVMEEFERRMQIQQETFKTTQEDKPSSETEQSISKDASVDEAIEENEDGEQLQEKQEECDDEKYNSDAEESSRLNLKQLSIVEEQNRSVQEVKHIVHQTKSGMQFLQKEYHKDMINLSKHLHSLAAAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGKSNQNSVVSSVEEGSMAIMIPPNSKLGKEGKKTFNFNKAFGSTSTQAEVFSDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMAGPDNLDEDTIGVNYRALKDLFFLSDQRKDTINYVISVQMLEIYNEQVRDLLAPEEIRNSSNNGINVPDANLVPVSTTSDVINLMNLGHKNRAVGSTSMNERSSRSHSCLTVHVHGKNLVSGSIIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAARVNKDNSEVKELKEQIASLKAALARKDGEAEQFQQPTNNGHVIPKLKSHASSPPIQQRSSTSSGGRKQPKDDSSSVMGEKKGASKLKRRSLDLHDMYNRSSPPWPHVNNNQGVNGKEDDKESVSGRMNRNDSFTSDDSLVGQWEAESKQYSPLLSPSSLSENSKLCSDPGYEMTNMTTDESDELEIATSDSSESDMNWLIQAPKPTLLSNGLGSKLKKPTNPRPTKIPEVRSMIPSLIPTPSKKQSIPIIQGRKHPGSSDVKRRSGNAK 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04847 1011 Coils Coil 744 771 - -
Trre14g04847 1011 CDD CH_AtKIN14-like 48 165 - -
Trre14g04847 1011 Gene3D - 39 170 IPR036872 -
Trre14g04847 1011 Pfam Calponin homology (CH) domain 49 165 IPR001715 GO:0005515
Trre14g04847 1011 MobiDBLite consensus disorder prediction 216 236 - -
Trre14g04847 1011 MobiDBLite consensus disorder prediction 320 334 - -
Trre14g04847 1011 MobiDBLite consensus disorder prediction 869 883 - -
Trre14g04847 1011 MobiDBLite consensus disorder prediction 769 883 - -
Trre14g04847 1011 Pfam Kinesin motor domain 421 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04847 1011 MobiDBLite consensus disorder prediction 280 335 - -
Trre14g04847 1011 MobiDBLite consensus disorder prediction 305 319 - -
Trre14g04847 1011 SUPERFAMILY Calponin-homology domain, CH-domain 49 168 IPR036872 -
Trre14g04847 1011 CDD KISc_C_terminal 413 739 - -
Trre14g04847 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 415 773 IPR027417 -
Trre14g04847 1011 Coils Coil 395 415 - -
Trre14g04847 1011 Coils Coil 267 287 - -
Trre14g04847 1011 PRINTS Kinesin heavy chain signature 638 656 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04847 1011 PRINTS Kinesin heavy chain signature 607 624 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04847 1011 PRINTS Kinesin heavy chain signature 491 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04847 1011 PRINTS Kinesin heavy chain signature 687 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04847 1011 PANTHER KINESIN-LIKE PROTEIN KLP-3 53 898 IPR027640 GO:0003777|GO:0007018
Trre14g04847 1011 ProSitePatterns Kinesin motor domain signature. 637 648 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre14g04847 1011 SMART kinesin_4 413 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04847 1011 MobiDBLite consensus disorder prediction 285 304 - -
Trre14g04847 1011 ProSiteProfiles Calponin homology (CH) domain profile. 46 168 IPR001715 GO:0005515
Trre14g04847 1011 ProSiteProfiles Kinesin motor domain profile. 415 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04847 1011 MobiDBLite consensus disorder prediction 814 837 - -
Trre14g04847 1011 FunFam Kinesin-like protein KIN-14I isoform A 410 779 - -
Trre14g04847 1011 Gene3D Kinesin motor domain 410 778 IPR036961 -
Trre14g04847 1011 MobiDBLite consensus disorder prediction 773 812 - -
Trre14g04847 1011 MobiDBLite consensus disorder prediction 946 1011 - -
Trre14g04847 1011 SMART ch_5 48 166 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04847 Trre-Chr14 55618969 55624860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04847 403 773 Calmodulin-binding Proteins AT5G65930 40.000 2.66e-75 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04847 K10406 - gmx:100799535 1348.57