Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04846 ATGTCAAACGACCAAGTTTTATCATTCTCTGTTGTTTCTGTCGTCGAAGATGTTATTATTCAACAACAACAACAACAACAACAGGGTGCCCGGTCCAGTGATTACAAATTTGTCTCCAGAAAAACCGAAGAAGCTTCTTTGAGAAGGTATGAAGCGGCCGGTTGGTTGCGAAAAACGGTTGGAGTTGTTGGAGGGAAGGACTTACCAGCTGAACCTTCTGAAGAAGATTTTAGGATTGGTTTGCGTAGTGGGATTATTCTCTGCAATGCTCTCAACAAAATTCAACCTGGAGCAGTGGCTAAGGTGGTTGAAGGCCCTTGTGATTCTGTTCTTGTTCCTGATGGAGCAGCATTATCTGCTTTTCAATACTTTGAAAATCTAAGGAATTTTCTTGTAGCTGTTGAAGAAATGGGACTTCCTACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGAATAGTGAATTGTGTTTTAGCAATGAAATCATTTGCTGAAGGGACACTTGGAGGAAGAAGTGGATCAGGGTCATTCAAATTTGGTCAAAAGCCACCTACATCCGCGAAACCAATTTTGAGGAAAAACTCAGAACCATTCATGAAATCACTATGGAGTATGACATTAGGCGACAAAGATGGTTACACGAGTGATAACTCTTCATACAATGAATCTGGAAATGATCGCCATGAAGGGGGTTCGTTTTCTTCCTTAAATTCACTAGTTCGCCAATATTTGTTTAATAAGAGGCCAGAAGAAATTCCCATTGCAGTGGAGTCTCTACTTAACAAAGTCATGGAAGAGTTTGAGCGTCGGATGCAAATTCAGCAAGAAACGTTTAAAACAACTCAAGAAGATAAGCCATCGTCTGAAACGGAACAATCAATTTCAAAAGATGCTTCGGTTGATGAAGCGATGGAAGAAAATGAAGACGGAGAACAGTTGCAAGACAAGATGGAAGAAAATGAAGATGAACAACAGTTGCAAGACAAGATCGAAGAAAATGAAGATGGAGAACAGTTGCAAGAAAAACAAGAGGAATGCGATGATGAGAAATACAATAGTGATGCCGAAGAATCAAGCAGACTGAATTTGAAGCAGCTAAGTATAGTCGAGGAACAAAATAGAAGTGTCCAGGAAGTGAAACACATTGTACATCAAACGAAATCGGGAATGCAGTTTCTGCAAAAGGAATACCACAAGGATATGATCAATCTAAGTAAGCACCTGCATAGTCTAGCTGCTGCTGCTTCGGGATATCATAAAGTTCTCGAAGAAAACCGCAAGTTATACAATCAAGTGCAGGACCTTAAAGGAAACATTAGGGTGTACTGTCGAGTTCGACCGTTCTTGGGAGGGAAATCAAATCAAAATAGCGTTGTCAGCAGCGTGGAGGAAGGAAGTATGGCAATCATGATACCTCCCAATTCCAAACTTGGTAAAGAAGGAAAGAAGACATTTAACTTCAATAAAGCTTTTGGTTCTACTTCAACACAAGCGGAAGTATTCTCGGATATGCAACCTCTGGTCCGTTCTGTTCTTGATGGTTACAATGTTTGTATTTTTGCATACGGCCAAACAGGTTCCGGAAAAACGTACACTATGGCAGGACCAGACAATCTTGATGAGGACACAATAGGTGTGAACTACCGTGCGTTGAAGGATCTCTTCTTTCTCTCGGATCAGAGGAAAGACACCATTAACTATGTAATCTCAGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTACTAGCTCCAGAGGAAATCCGCAATAGTTCCAATAATGGCATCAACGTGCCAGATGCGAACCTTGTTCCAGTTTCAACCACTTCCGATGTCATAAATTTGATGAACTTGGGACATAAAAATCGCGCTGTTGGTTCTACTTCCATGAACGAACGTAGCAGTCGTTCTCACAGTTGCTTGACAGTTCATGTTCATGGAAAGAACTTGGTATCAGGAAGCATTATTCGAGGTAGTATGCATCTTGTTGACCTTGCAGGAAGTGAGAGGGCCGATAAAACTGAGGCCACGGGAGATAGACTTAAAGAGGCTCAACATATCAACAAGTCACTTTCTGCCTTAGGGGATGTAATCGCTTCCCTTGCGCAGAAGAATGCACATGTTCCATATCGGAACAGTAAACTTACTCAGCTACTTCAGGATGCACTCGGAGGGCAGGCCAAAACTCTCATGTTTGTTCATATTAGTCCGGAACCTGATGCTCTTGGAGAAACACTAAGTACACTCAAGTTCGCAGAACGCGTATCCACCGTTGAACTAGGAGCTGCCAGAGTAAATAAAGATAACTCTGAAGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCAGCCTTAGCGAGGAAGGATGGAGAAGCAGAACAGTTTCAACAACCTACCAATAATGGTCATGTAATACCCAAGTTAAAATCGCATGCATCGTCACCTCCCATACAACAACGTAGTTCAACATCTTCTGGAGGCCGTAAGCAGCCAAAGGACGATTCTAGTAGCGTAATGGGTGAGAAAAAGGGTGCATCAAAGCTGAAAAGAAGAAGCCTAGATCTTCATGACATGTATAATAGGAGTTCACCACCATGGCCACATGTTAACAACAATCAAGGAGTAAATGGAAAAGAGGACGATAAGGAATCGGTTTCAGGAAGGATGAACAGAAATGACAGCTTCACAAGTGATGATAGCTTAGTGGGACAATGGGAAGCAGAAAGTAAACAATACTCTCCATTGTTAAGTCCAAGTTCTCTTTCAGAAAATTCAAAGTTATGTTCAGATCCCGGGTATGAGATGACTAATATGACCACAGATGAATCTGATGAGCTTGAAATTGCAACCAGTGATTCTTCAGAATCAGACATGAATTGGTTAATACAGGCACCTAAACCAACCTTACTTTCAAATGGATTAGGCTCTAAGTTAAAGAAACCTACTAATCCTAGACCAACAAAAATCCCAGAAGTCAGGAGTATGATTCCATCATTAATTCCTACTCCATCAAAGAAACAATCAATTCCAATTATTCAAGGAAGAAAGCATCCAGGATCAAGTGATGTAAAGAGGAGGAGTGGGAATGCAAAGTGA 3114 0.4127 MSNDQVLSFSVVSVVEDVIIQQQQQQQQGARSSDYKFVSRKTEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNALNKIQPGAVAKVVEGPCDSVLVPDGAALSAFQYFENLRNFLVAVEEMGLPTFEASDLEQGGKSSRIVNCVLAMKSFAEGTLGGRSGSGSFKFGQKPPTSAKPILRKNSEPFMKSLWSMTLGDKDGYTSDNSSYNESGNDRHEGGSFSSLNSLVRQYLFNKRPEEIPIAVESLLNKVMEEFERRMQIQQETFKTTQEDKPSSETEQSISKDASVDEAMEENEDGEQLQDKMEENEDEQQLQDKIEENEDGEQLQEKQEECDDEKYNSDAEESSRLNLKQLSIVEEQNRSVQEVKHIVHQTKSGMQFLQKEYHKDMINLSKHLHSLAAAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGKSNQNSVVSSVEEGSMAIMIPPNSKLGKEGKKTFNFNKAFGSTSTQAEVFSDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMAGPDNLDEDTIGVNYRALKDLFFLSDQRKDTINYVISVQMLEIYNEQVRDLLAPEEIRNSSNNGINVPDANLVPVSTTSDVINLMNLGHKNRAVGSTSMNERSSRSHSCLTVHVHGKNLVSGSIIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAARVNKDNSEVKELKEQIASLKAALARKDGEAEQFQQPTNNGHVIPKLKSHASSPPIQQRSSTSSGGRKQPKDDSSSVMGEKKGASKLKRRSLDLHDMYNRSSPPWPHVNNNQGVNGKEDDKESVSGRMNRNDSFTSDDSLVGQWEAESKQYSPLLSPSSLSENSKLCSDPGYEMTNMTTDESDELEIATSDSSESDMNWLIQAPKPTLLSNGLGSKLKKPTNPRPTKIPEVRSMIPSLIPTPSKKQSIPIIQGRKHPGSSDVKRRSGNAK 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04846 1037 CDD CH_AtKIN14-like 48 165 - -
Trre14g04846 1037 CDD KISc_C_terminal 439 765 - -
Trre14g04846 1037 MobiDBLite consensus disorder prediction 840 863 - -
Trre14g04846 1037 MobiDBLite consensus disorder prediction 216 236 - -
Trre14g04846 1037 ProSiteProfiles Kinesin motor domain profile. 441 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04846 1037 MobiDBLite consensus disorder prediction 799 838 - -
Trre14g04846 1037 PANTHER KINESIN-LIKE PROTEIN KLP-3 53 924 IPR027640 GO:0003777|GO:0007018
Trre14g04846 1037 FunFam Kinesin-like protein KIN-14I isoform A 436 805 - -
Trre14g04846 1037 MobiDBLite consensus disorder prediction 972 1037 - -
Trre14g04846 1037 Coils Coil 770 797 - -
Trre14g04846 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 799 IPR027417 -
Trre14g04846 1037 Coils Coil 421 441 - -
Trre14g04846 1037 MobiDBLite consensus disorder prediction 795 909 - -
Trre14g04846 1037 MobiDBLite consensus disorder prediction 895 909 - -
Trre14g04846 1037 Coils Coil 303 336 - -
Trre14g04846 1037 SUPERFAMILY Calponin-homology domain, CH-domain 49 168 IPR036872 -
Trre14g04846 1037 Coils Coil 267 287 - -
Trre14g04846 1037 SMART kinesin_4 439 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04846 1037 PRINTS Kinesin heavy chain signature 713 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04846 1037 PRINTS Kinesin heavy chain signature 633 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04846 1037 PRINTS Kinesin heavy chain signature 664 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04846 1037 PRINTS Kinesin heavy chain signature 517 538 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04846 1037 MobiDBLite consensus disorder prediction 280 362 - -
Trre14g04846 1037 Gene3D Kinesin motor domain 436 804 IPR036961 -
Trre14g04846 1037 MobiDBLite consensus disorder prediction 285 304 - -
Trre14g04846 1037 ProSiteProfiles Calponin homology (CH) domain profile. 46 168 IPR001715 GO:0005515
Trre14g04846 1037 Gene3D - 39 170 IPR036872 -
Trre14g04846 1037 MobiDBLite consensus disorder prediction 305 321 - -
Trre14g04846 1037 MobiDBLite consensus disorder prediction 346 360 - -
Trre14g04846 1037 Pfam Kinesin motor domain 447 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre14g04846 1037 ProSitePatterns Kinesin motor domain signature. 663 674 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre14g04846 1037 Pfam Calponin homology (CH) domain 49 165 IPR001715 GO:0005515
Trre14g04846 1037 SMART ch_5 48 166 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04846 Trre-Chr14 55618969 55624860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04846 429 799 Calmodulin-binding Proteins AT5G65930 40.000 3.26e-75 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04846 K10406 - gmx:100799535 1357.81