Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04835 ATGGATCGAGAAGGAGGTGGATCCAACGATGGATCTTCTTATTACTCTGTTCTTGGTATTCGCAGCGACGCCTCCTCCTCTGATATTCGCACTGCTTACCGCAAACTCGCTATGAGATGGCACCCTGATAAATTCGCTCGGAACCCTAACACCGCCGGAGAAGCCAAACGACGGTTTCAGCAAATTCAAGAAGCATACTCAGTTCTCTCTGATGAGTCTAAGAGATCAATGTACGATGCTGGACTCTACGATCCTCTTGAAGAAGAAGATCAAGAATTTTGTGATTTTATGAGCGAAATGATCTCAATGATGAACAATGTCAAAGATGAGGGGGATAGTTTGGAGGATCTACAGAGGATGTTTGTTGAGATGGTAGGTGGAGATGGCATGAGCTTTGAATTGAACCAAGATCAGACGGCTGGGAAGAGAGGACGCACTAGCAGTGGATCAAGAGGCAACAATGCCAAGCGCAGCAATCATTGCCGCTAG 489 0.4642 MDREGGGSNDGSSYYSVLGIRSDASSSDIRTAYRKLAMRWHPDKFARNPNTAGEAKRRFQQIQEAYSVLSDESKRSMYDAGLYDPLEEEDQEFCDFMSEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGMSFELNQDQTAGKRGRTSSGSRGNNAKRSNHCR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04835 162 Pfam DnaJ domain 14 79 IPR001623 -
Trre14g04835 162 MobiDBLite consensus disorder prediction 132 162 - -
Trre14g04835 162 Gene3D DnaJ domain 2 103 IPR036869 -
Trre14g04835 162 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Trre14g04835 162 PRINTS DnaJ domain signature 54 74 IPR001623 -
Trre14g04835 162 PRINTS DnaJ domain signature 15 33 IPR001623 -
Trre14g04835 162 PRINTS DnaJ domain signature 33 48 IPR001623 -
Trre14g04835 162 SUPERFAMILY Chaperone J-domain 12 85 IPR036869 -
Trre14g04835 162 CDD DnaJ 14 71 IPR001623 -
Trre14g04835 162 ProSiteProfiles dnaJ domain profile. 13 82 IPR001623 -
Trre14g04835 162 SMART dnaj_3 12 74 IPR001623 -
Trre14g04835 162 PANTHER PUTATIVE, EXPRESSED-RELATED 9 145 - -
Trre14g04835 162 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04835 Trre-Chr14 55571606 55572706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04835 14 80 C2H2 Transcription Factor Family AT1G74250 42.647 9.24e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04835 - - mtr:11423150 286.574