Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04834 ATGAAACTCTCCCACAGTGTGAAAAAATTGAGTGACTACGATGATCTCTACAAATTCTACTTTCTTGCTGAGTCTCAAATATGTACGAACTCATATGGTTGCAAGGTTGATACTCTAATGAGAAAGAATGTTATAGACTGGTTGATTCAAAAACATCATGAACAAAAACTCAATTCAGAAACCCTTTATCTTTCTATCAACATTCTTGATCGATTTCTTTCTAAAACCGATTTTGAAGTCACAACACAGAGCAAATTTGAACTCATTGGTCTTACATCGTTGTTGTTAGCTTCCAAGTATGAACAAAAAAGCGCGGTTGGTGTTTACGACATTGAATACATGGCAGACTACTCTTTTACTCCAGATGAAATATGTGAGATGGAGAAACTTATCTTAAAAAAGCTTAATTGGATTTTATCAGTTCCAACTCCTTATGTGTTTCTTGTTAGAAACATAGGATCATGTCCCTTATCTGATGAAGATAGAATCATCGAGAATTTGGCATCTTTCTTCTCTGAACTAAGCTTGACACAATATTCCATTGTGTGTGACTACAAGCCTTCGATGATCGCCGCTGCTGCAATGTATTGCGCAAGAGTTCTTGTTGGAAGGTATCCGTTTTGGAACGCTGATTTGATGATTTCTGCAAGATATTCTGAGCAGATGCTATGGCCATGTGTTAAGGTTATGATGGAGCTGTGTAACGAAACATGTAAAGATGGAACAATGGAAGTGTTCAAGAAATTTTCAAGCTTATACCGATCAAGAGTTTCATGTATTGCTCAAGAAATTCTTGAACAAACTTTTTTATCTTAG 816 0.3603 MKLSHSVKKLSDYDDLYKFYFLAESQICTNSYGCKVDTLMRKNVIDWLIQKHHEQKLNSETLYLSINILDRFLSKTDFEVTTQSKFELIGLTSLLLASKYEQKSAVGVYDIEYMADYSFTPDEICEMEKLILKKLNWILSVPTPYVFLVRNIGSCPLSDEDRIIENLASFFSELSLTQYSIVCDYKPSMIAAAAMYCARVLVGRYPFWNADLMISARYSEQMLWPCVKVMMELCNETCKDGTMEVFKKFSSLYRSRVSCIAQEILEQTFLS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04834 271 SMART Cyclin_C_2 142 263 IPR004367 -
Trre14g04834 271 SUPERFAMILY Cyclin-like 12 137 IPR036915 -
Trre14g04834 271 PANTHER CYCLINS 13 238 IPR039361 -
Trre14g04834 271 Gene3D - 135 269 - -
Trre14g04834 271 Pfam Cyclin, C-terminal domain 142 260 IPR004367 -
Trre14g04834 271 Gene3D - 30 134 - -
Trre14g04834 271 ProSitePatterns Cyclins signature. 41 72 IPR006671 -
Trre14g04834 271 FunFam G2/mitotic-specific cyclin 27 140 - -
Trre14g04834 271 SMART cyclin_7 46 133 IPR013763 -
Trre14g04834 271 SMART cyclin_7 146 232 IPR013763 -
Trre14g04834 271 Pfam Cyclin, N-terminal domain 24 139 IPR006671 -
Trre14g04834 271 PIRSF Cyclin_A_B_D_E 5 269 IPR046965 GO:0016538|GO:0044772
Trre14g04834 271 SUPERFAMILY Cyclin-like 141 261 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04834 Trre-Chr14 55550081 55550896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04834 14 250 Core Cell Cycle Gene Families AT2G26760 37.083 4.01e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04834 K21777 - jre:109013760 185.267