Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04831 ATGGTTTGCCAAGAAGAGTTATTGATTGAAAAAGTTTTTAATTTGTATGAACAAATTTCAAGTCTTGAATCTCTCAAACCTAGCAAAAATGTCGACATGCTTTTCACTGATCTTGTCCTCACATGCATGCCACCTAGTCCTATAGATGTCACAACCCTCCCAAAAATATTGCAAGAAAAAAGATCCCATCTTATAAGGCTATGTGGTGAAGCTGAAGGGTATTTGGAGAGACACTACTCAGCCATCTTAGGCTCATACCAAAACCCTCTTGACCATCTTCATATTTTCCCTTACTATTCTAACTACATCAAACTTGGTCACCTTGAGTTTTCTATCCTTAGCCAACACTGCACTCATGTCCCTAGTAAAATTGCTTTCATTGGTTCTGGACCCCTTCCCCTTACTTCAATTGTTTTGGCATCAAATCATTTGCCTTCAACCACTTTTCACAATTATGACATCGATCCTTTAGCCAATTCAAGTGCTATGCATCTGGTTTCATCTGATCCTGACTTGTCAAATCGAATGGTTTTTCACACCAGTGACATATTGGATGTGTCAAACGATTTGAAAGACTATGAAATCGTTTACTTGGCTGCCCTTGTCGGTATGGACAAGGAGGAAAAGAATCGGATCATTGATCATTTAGGGAAGCACATGGCTCCAGGAGCACTTCTTATGCTAAGGAGTGCTCACGGGGCTCGTGCTTTTCTGTATCCAGTGGTTGAATCTTCTGATCTTCGAGGCTTTGAGGTCCTCTCTGTGTTCCATCCTATGGACGAGGTTATCAATTCAGTTGTCATATCGCGTAAGTATCCTTCGCCTAAACACTCACTTGATCAAGGTCTTGGTTCCATGATCCTACCAAACAAGTGTTCTGAGATTCAAGTCATTAACTCTCTTAGGGGCCTCAACCATGGGAATATGATTGAGGAATTGACCATTGAGGATCAACTCTTGTAA 963 0.4091 MVCQEELLIEKVFNLYEQISSLESLKPSKNVDMLFTDLVLTCMPPSPIDVTTLPKILQEKRSHLIRLCGEAEGYLERHYSAILGSYQNPLDHLHIFPYYSNYIKLGHLEFSILSQHCTHVPSKIAFIGSGPLPLTSIVLASNHLPSTTFHNYDIDPLANSSAMHLVSSDPDLSNRMVFHTSDILDVSNDLKDYEIVYLAALVGMDKEEKNRIIDHLGKHMAPGALLMLRSAHGARAFLYPVVESSDLRGFEVLSVFHPMDEVINSVVISRKYPSPKHSLDQGLGSMILPNKCSEIQVINSLRGLNHGNMIEELTIEDQLL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04831 320 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Trre14g04831 320 Gene3D Vaccinia Virus protein VP39 5 273 IPR029063 -
Trre14g04831 320 PANTHER NICOTIANAMINE SYNTHASE 3 4 293 IPR004298 GO:0030410|GO:0030418
Trre14g04831 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04831 Trre-Chr14 55523597 55524559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04831 1 314 Nicotianamine Synthase Gene Family AT5G04950 60.815 8.90e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04831 K05953 - gmx:100803630 521.546