Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04822 ATGGAGAAAAAACGTTCCAAGGGAAGCTTCTTTAGCTTGTTTGATTGGAATGCCAAATCTCGTAAGAAGCTTGTTTGGAACAATCCAACCTCACAACCTGAAGTTTCAAGGCATGGAAAGGAAAATCTAGAGACCTTGCCAGAGTCACAATTCAATAGGATAAAGGTGGATGAAAATGGAGCAAGTCCGAGTAATATTGCAAGTGGTGATTTTCACTGCTCCTTATCGATCTGTAGTGATGAAGGGTGTGGGAGTAAAGCCCCTGGGTTAGTTGCAAGACTGATGGGTTTGGATTCTCTGCCAACTTCTGAAGTCAGTGAGCTTTCCGGTGCTTCATTATACAGCTCCAATTCTCATGGAGCTTCTCATTATAATGAGGGTGCTCTTCGTTCCATGGATGACTTCCGTCGTGCGGACTACTTAAACACACCACTTAAGCCGGAGAAGTCTTCTTGGGATGCCATGGAATCAAGGGCACATAAAATGGAAAATCGGCAAATGAAGAGATTTCAAACTGAAATGTTGCCCCCAAAGTCGGCTAAACCCATTCCAGTTACTCACAATAGATTATTGTCTCCCATTAAAAGTAATGGTTATCTGCCTCAGAAGAATGTAGTTCAGATAATCGAGGCGGCTGCTAAGATAATTGATGGAAGTCCTCAGCCATATATGAGGAATAGAATACTATCAGGGGAGTCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAATATGCACCCGTGTCTAGAAAGTTAGTCGATTCGAACAATGGCAACACTTCAAATTGCAAGCCTGGTGAGAGGAGCTCTAATTTGTACAGAAATACATCATCATTGAAGGGTTCAAGAGATTCTGAGAAACGTGGTTCTTGTCATCCAACAAGTAAAGGAAAATCAGGTTCTATGCAAACCAAAAACAATGTTCAAAGCAGAGATACATTGGTTTCAAATGGAAATAGGAAATATATGAAGCAGAAAGAGCAGAATGAGACAAAGTCAAATCAGCTCACAAGGAACCAGAAGCCAATTACAAACCGAGCATTACCGCAGAAAACGAGTGCAAACCGTAATAGCAATGTGCTGGTACCGAATAATCAGAAGCAAAATAGCATGACTTCCAAAGGTAAATCAGCTTCAAAAACAGATTTCAATAAGCCGACAACACGAGGTTCATCTTCAGAAAATTCTAGTGGAACCAGGAAGGCAACAAACAAGGGTGCTACAAATGTCAATGTTCAGCCTAAAAGGTCAAGTTCTAGGGTAGCCGATAACCGAAATGAGTTTCCCCCATCCAAAGCACATAGTATTTCCCAAAAGAAAAAGTATAACAGCAGAGGTGCTCATGAGGTAAGAAGTCCTGATCATGTAAGAAATGATTTCGAAAGCAAGTCCATAAAATGCAATTTTACAACTGATGGAAGTATTGATCAGAATGCTTTTAACATGAATGAAAGCAATGATGTTGTTTCATTTACATTTACATCTCCTTTGAGGAGAAGCATGCCCGAGGATCTTGGACATAGTGATAATCTTCAACCCAAAAAATTATCACTATCTCCGACACATATGATAGATAGCGATGTATTGAGTGTTCTGTTGGAGCAAAAGCTACAAGAATTGACATCGAGACTTAACTTACCTCAGTGTACCCTAGCCTCGGAGGAGCCTTATACTGGTTTGAGATCTAGTTTTCAAGACAAAGCATCCAGTAAGGTAAACAGCACAGTTAAGGAGCAAGATGAAATGTTCAATGATGAACTTAATGGAATTCATAACTATCGATACGGTTCAAGTGATGGTCCAGTGCTTAACATGAACCAGCAACTGCAGATATCAGAAGTAAGGGAAGATACTAACTGTAGCAGCAACAATGAAAGTGGAAATGATCTAGGTTGTCAGTATTCCAATACTGATACACTTTTTCAAGCTCCTTCTGTCAGTGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACAATTTATTCTTCCATGCAAGATGAAGAAGTGTCTAATATTTCCCAGATAAATGAATCTGAATTAATTGAAAATGAGGTGACATGGTCAGAACAAAGCTCTTCTGTATCTATGGGGCACAATGTGGCTATCACACAAATAATCAGAACACCAAACATGGTAGATTTGAAAAGATCAAGCAACATGGAACTTGAATATGTACAGAACATACTTAACAATGCAGAATTTATGGCAGAAGAATTCGTCTTGGGTCGGACTAATACCGTCATAATGCCAAATCTCTTTGATCTGTTGGAGAATCAGAGTACAGGAACAACATACTGTGGAGAAGAAGAGTACTCTAAGCTTGAAAGAAAGGTTTTATTCGACTTTGTGAGTGAGAGTCTAGAGTTAAAATGTGAAAAAGCTTTTGTTGGAAGTTGTAAAGGATGGCCTAGATGGGTGACATCAATTCAGAGGAAGGACATGTTGGCAGAAGAATTGTACAAGGAGATGATGAGTTATAGGAACATGGAAGAGGTAATGGTGGATGAGCTTGTCAGCAATGAGATGAGCAGTGGATATGGGAAATGGCTTGACTTTGACATTGAAACATTTGAAGAGGGATTAGAGGTTGAAGAGGACATACTAGAATGTTTGATTGATGAATTTGTTTCTGATTTGTTGGTTGTTTAA 2676 0.3954 MEKKRSKGSFFSLFDWNAKSRKKLVWNNPTSQPEVSRHGKENLETLPESQFNRIKVDENGASPSNIASGDFHCSLSICSDEGCGSKAPGLVARLMGLDSLPTSEVSELSGASLYSSNSHGASHYNEGALRSMDDFRRADYLNTPLKPEKSSWDAMESRAHKMENRQMKRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGYLPQKNVVQIIEAAAKIIDGSPQPYMRNRILSGESSSVPLRILDLKERLEAAQYAPVSRKLVDSNNGNTSNCKPGERSSNLYRNTSSLKGSRDSEKRGSCHPTSKGKSGSMQTKNNVQSRDTLVSNGNRKYMKQKEQNETKSNQLTRNQKPITNRALPQKTSANRNSNVLVPNNQKQNSMTSKGKSASKTDFNKPTTRGSSSENSSGTRKATNKGATNVNVQPKRSSSRVADNRNEFPPSKAHSISQKKKYNSRGAHEVRSPDHVRNDFESKSIKCNFTTDGSIDQNAFNMNESNDVVSFTFTSPLRRSMPEDLGHSDNLQPKKLSLSPTHMIDSDVLSVLLEQKLQELTSRLNLPQCTLASEEPYTGLRSSFQDKASSKVNSTVKEQDEMFNDELNGIHNYRYGSSDGPVLNMNQQLQISEVREDTNCSSNNESGNDLGCQYSNTDTLFQAPSVSESYLDSEDSAYGSTIYSSMQDEEVSNISQINESELIENEVTWSEQSSSVSMGHNVAITQIIRTPNMVDLKRSSNMELEYVQNILNNAEFMAEEFVLGRTNTVIMPNLFDLLENQSTGTTYCGEEEYSKLERKVLFDFVSESLELKCEKAFVGSCKGWPRWVTSIQRKDMLAEELYKEMMSYRNMEEVMVDELVSNEMSSGYGKWLDFDIETFEEGLEVEEDILECLIDEFVSDLLVV 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04822 891 MobiDBLite consensus disorder prediction 259 464 - -
Trre14g04822 891 MobiDBLite consensus disorder prediction 449 464 - -
Trre14g04822 891 MobiDBLite consensus disorder prediction 336 444 - -
Trre14g04822 891 Coils Coil 326 346 - -
Trre14g04822 891 MobiDBLite consensus disorder prediction 25 44 - -
Trre14g04822 891 MobiDBLite consensus disorder prediction 259 286 - -
Trre14g04822 891 Pfam Domain of unknown function (DUF4378) 730 883 IPR025486 -
Trre14g04822 891 MobiDBLite consensus disorder prediction 301 329 - -
Trre14g04822 891 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 887 - -
Trre14g04822 891 Pfam DUF761-associated sequence motif 79 106 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04822 Trre-Chr14 55454911 55458620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04822 1 889 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.968 3.69e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04822 - - tpra:123890979 1628.61