Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04820 ATGGCAGCGAAGAGGACATCTCATGATGATGATAGTACTAAGAATCTCCATGTTCCTAGTACTAAGCGAATCAAACATCATGATGACATCTTTGCCTTTTCCATTGTACACTCATTACGAAAAGTGGTGCGAGAGGTGATTCCGCCTATGTTTGACCGCTACCTAGCCCCAAGTCGTGGATTGACCCTTAACAGCCGGGTCAATCCATATGGAAGAAGAGGTTTGCAATTGTGTTTCAAGAACAATTTGCCTCAAAGAAATTACACAGATTCCAAAATCAAAGCTGAGGGAGGTGAACCACTTCGAATTGAACTGCGCGATGCTGAAAATCAGCACATAGTGAGGGGTGAGGGTTCATCAATGAGGATCCAGATCTGTGTCTTACATGGTGACTTTGGAAATGAAGATTGGACTGCTGAGGAATTTGATAAGCAAATTGTAATTCCAAGAGAGAGAAACGGAGCACTGCTAAAAGGAGATACAATCATTACACTAAAAGATGGAGTTGCTTACATCAACAACATGGAGTTTACTGATATATCTAAGGGAAGAACCAAAGAATTTCGGTTAGGGGCTAAAATAGTCCGATCTAATTCAATTGGATCGGATATTAGGGAAGGTAGAAGCGAACCTTTTAGGGTCTGGCATCTTCGAGGAAAGGCTAATGAGAAACACGGTCGTCCATCGATGAATGATGAGGTATGGCGTCTGAAAGGAATCGGTAAAAATGGTAAATTTCACACGGAATTGGGCTCACATGGAATAAAAAGTGTAAAGGATTTTTTGCAGTTGTACAAAACCAATGAAGCTTCATTAAGAGAGAAAATAGGCAAGATCACAGAGAAGTCGTGGAACACAATTATTGCACATGTCAAAGAGTGTGATGTAGATGATGATGATGATGATGATGATGATGATGATGATGATGGTGGTGGTGAACATGCTTACAAACATTTGAATGATCTGAAACAAATGCCAATTGATACAACAATACATGGTTTGGTGGAGACATCAACAGGTGTACAAACTGCACAATATGGTGGCCTAGATCAGACTCTGCAACAATTTGACTTTCCAATTGCTCAGCAAGGTTTACTGAATACTGATCCTACAAGCTTTAACCTATCAGAAATGTGGCCATCCACCTTAATCTCAGAGAGTGACCTGGTAGCATTGGGAGAAATGGCACCATACTTGTATGGAGAGGGAAATATGCTCTCTGGATTGGATGAAGTATCACAAACTGGTCAATTTGGAAGAAGTTTCTCAATGGAGCAATTTAATGCAAATAATTTTTCCTTTGTTTATGGTGATGGAGCAGGACCTAGCAACCATTCCTCATCATCCAACTTTGCTGAGCATACATCAAGCAATGTGAAACTGAAAAAAGATTGGCAAAAGATTCGATCAGCTCTCAAATGGTTCATGCTGTATGTAGATGTGTCTAGAAAGAGGGAACAATTTTTGTTCATATATACTCCCTGA 1485 0.402 MAAKRTSHDDDSTKNLHVPSTKRIKHHDDIFAFSIVHSLRKVVREVIPPMFDRYLAPSRGLTLNSRVNPYGRRGLQLCFKNNLPQRNYTDSKIKAEGGEPLRIELRDAENQHIVRGEGSSMRIQICVLHGDFGNEDWTAEEFDKQIVIPRERNGALLKGDTIITLKDGVAYINNMEFTDISKGRTKEFRLGAKIVRSNSIGSDIREGRSEPFRVWHLRGKANEKHGRPSMNDEVWRLKGIGKNGKFHTELGSHGIKSVKDFLQLYKTNEASLREKIGKITEKSWNTIIAHVKECDVDDDDDDDDDDDDDGGGEHAYKHLNDLKQMPIDTTIHGLVETSTGVQTAQYGGLDQTLQQFDFPIAQQGLLNTDPTSFNLSEMWPSTLISESDLVALGEMAPYLYGEGNMLSGLDEVSQTGQFGRSFSMEQFNANNFSFVYGDGAGPSNHSSSSNFAEHTSSNVKLKKDWQKIRSALKWFMLYVDVSRKREQFLFIYTP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04820 494 MobiDBLite consensus disorder prediction 295 316 - -
Trre14g04820 494 MobiDBLite consensus disorder prediction 1 20 - -
Trre14g04820 494 MobiDBLite consensus disorder prediction 295 310 - -
Trre14g04820 494 Pfam Calmodulin binding protein central domain 230 294 IPR046830 -
Trre14g04820 494 Pfam Calmodulin binding protein-like N-terminal domain 75 214 IPR046831 -
Trre14g04820 494 PANTHER OS02G0177800 PROTEIN 34 305 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04820 Trre-Chr14 55425851 55428007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04820 31 300 Calmodulin-binding Proteins AT5G26920 39.273 1.07e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04820 - - tpra:123890981 616.69