Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04819 ATGGCAGCGAAGAGGACATCTCATGATGATGATAGTACTAAGAATCTCCATGTTCCTAGTACTAAGCGAATCAAACATCATGATGACATCTTTGCCTTTTCCATTGTACACTCATTACGAAAAGTGCGAGAGGTGATTCCGCCTATGTTTGACCGCTACCTAGCCCCAAGTCGTGGATTGACCCTTAACAGCCGGGTCAATCCATATGGAAGAAGAGGTTTGCAATTGTGTTTCAAGAACAATTTGCCTCAAAGAAATTACACAGATTCCAAAATCAAAGCTGAGGGAGGTGAACCACTTCGAATTGAACTGCGCGATGCTGAAAATCAGCACATAGTGAGGGGTGAGGGTTCATCAATGAGGATCCAGATCTGTGTCTTACATGGTGACTTTGGAAATGAAGATTGGACTGCTGAGGAATTTGATAAGCAAATTGTAATTCCAAGAGAGAGAAACGGAGCACTGCTAAAAGGAGATACAATCATTACACTAAAAGATGGAGTTGCTTACATCAACAACATGGAGTTTACTGATATATCTAAGGGAAGAACCAAAGAATTTCGGTTAGGGGCTAAAATAGTCCGATCTAATTCAATTGGATCGGATATTAGGGAAGGTAGAAGCGAACCTTTTAGGGTCTGGCATCTTCGAGGAAAGGCTAATGAGAAACACGGTCGTCCATCGATGAATGATGAGGTATGGCGTCTGAAAGGAATCGGTAAAAATGGTAAATTTCACACGGAATTGGGCTCACATGGAATAAAAAGTGTAAAGGATTTTTTGCAGTTGTACAAAACCAATGAAGCTTCATTAAGAGAGAAAATAGGCAAGATCACAGAGAAGTCGTGGAACACAATTATTGCACATGTCAAAGAGTGTGATGTAGATGATGATGATGATGATGATGATGATGATGATGATGATGGTGGTGGTGAACATGCTTACAAACATTTGAATGATCTGAAACAAATGCCAATTGATACAACAATACATGGTTTGGTGGAGACATCAACAGGTGTACAAACTGCACAATATGGTGGCCTAGATCAGACTCTGCAACAATTTGACTTTCCAATTGCTCAGCAAGGTTTACTGAATACTGATCCTACAAGCTTTAACCTATCAGAAATGTGGCCATCCACCTTAATCTCAGAGAGTGACCTGGTAGCATTGGGAGAAATGGCACCATACTTGTATGGAGAGGGAAATATGCTCTCTGGATTGGATGAAGTATCACAAACTGGTCAATTTGGAAGAAGTTTCTCAATGGAGCAATTTAATGCAAATAATTTTTCCTTTGTTTATGGTGATGGAGCAGGACCTAGCAACCATTCCTCATCATCCAACTTTGCTGAGCATACATCAAGCAATGTGAAACTGAAAAAAGATTGGCAAAAGATTCGATCAGCTCTCAAATGGTTCATGCTGTATGTAGATGTGTCTAGAAAGAGGGAACAATTTTTGTTCATATATACTCCCTGA 1482 0.4015 MAAKRTSHDDDSTKNLHVPSTKRIKHHDDIFAFSIVHSLRKVREVIPPMFDRYLAPSRGLTLNSRVNPYGRRGLQLCFKNNLPQRNYTDSKIKAEGGEPLRIELRDAENQHIVRGEGSSMRIQICVLHGDFGNEDWTAEEFDKQIVIPRERNGALLKGDTIITLKDGVAYINNMEFTDISKGRTKEFRLGAKIVRSNSIGSDIREGRSEPFRVWHLRGKANEKHGRPSMNDEVWRLKGIGKNGKFHTELGSHGIKSVKDFLQLYKTNEASLREKIGKITEKSWNTIIAHVKECDVDDDDDDDDDDDDDGGGEHAYKHLNDLKQMPIDTTIHGLVETSTGVQTAQYGGLDQTLQQFDFPIAQQGLLNTDPTSFNLSEMWPSTLISESDLVALGEMAPYLYGEGNMLSGLDEVSQTGQFGRSFSMEQFNANNFSFVYGDGAGPSNHSSSSNFAEHTSSNVKLKKDWQKIRSALKWFMLYVDVSRKREQFLFIYTP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04819 493 MobiDBLite consensus disorder prediction 294 315 - -
Trre14g04819 493 Pfam Calmodulin binding protein central domain 229 293 IPR046830 -
Trre14g04819 493 Pfam Calmodulin binding protein-like N-terminal domain 74 213 IPR046831 -
Trre14g04819 493 MobiDBLite consensus disorder prediction 1 20 - -
Trre14g04819 493 MobiDBLite consensus disorder prediction 294 309 - -
Trre14g04819 493 PANTHER OS02G0177800 PROTEIN 68 304 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04819 Trre-Chr14 55425851 55428007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04819 40 299 Calmodulin-binding Proteins AT5G26920 40.377 9.24e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04819 - - tpra:123890981 618.231