Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04818 ATGGCATCAAAGAGGACATCTCAATCTCATGATGAGGATAGTACTAAGGATCTTCATGTTCCTAGTACTAGTAGTACTACTAAGAGAATCAAACATTGCAACCCAGAACAAGAGATTCAACAACAAAACCCTTTATTTCCCACTACTATGACTCGTAGTGCCACCAATCACAACAACATCATTGCCTTTTACTTTGAACCCTTAATTCGAAAAGTGATGCTAGAGGTGATTCCACCTATGCTCGACCGCTACCTAGCCCCAAGTTGTGGATTGACCTTTAACGGCCGGGCTAAGCCATACGGAAGAAGAGGTTTGCAATTGTGCTTCAAGAACAATTTGCCTCAAAAAAATTACACACAATCCAAAATCGAAGCTAAGGGAGGTGGACCACTTCGAATTGAACTGCGCGATGCTGAAAATCAACGCATAGTGAGGGATGAGGGTTCGTCGATGAAGATCCAAATCTGTGTTCTACAAGGTGACTTTGAAAAAGAAGATTGGACTGCTGAGGAATTTGATAAGCAAATTTTAGGGGCTAAAATAGTCCGATCTAATTCAATTGGATCGGATATTAGGGAAGGTAGAAGCGAACCTTTTAGAGTCCTGGATGTTCGAGGAAAGGCTTACAAGAAACACGATCGTCCTTCAATGAATGACGAGGTATGGCGCTTGAGAGGAATAGGTAAAAATGGTAAACTTCACGCGGAGTTGCGCTTACATGGAATAAAAAGTGTTAAGGATTTGTTGCAGTTGTACAAAACCAATGAAGCTTCATTAAGAGAGAAAATAGGCAAGATTGCAGAGAAGTCATGGAACACAATTATTGCACATGTCAAAGAGTGTGAGGTAGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAGGAAAGAGTTAAGCAAGAAATGTCAATTGATACAACTAAACATGGTTTGGTGGAGACATCAACAGGTGTACAAACTGCACAATATGGTGGCTTAGATCAAAGTCTGCAACAATTTCACTTTCCATTTCCTCAGCAAGAAATGTGGACATCCACCTCAATCTCACAGAGTGACCAGATAGGCTCTGAATTTTATAACCAAATGTTAGCAATGGGAGACATGCAACCATACTTGTCTGGAGAGGGAAATATGATCTCTGAAGCATATAATTTTGATGGAGCATCACAAATTAGTCAATTTGGAAGTTACTCATTGGAACAAGTAAATGCAAATCATTTGCCCTTTGTTTATAGTGATGGAGCAGGACCTAGCAATCATTCCTCTTCCCTTAACTTTGCTGTGCATATATCAAGCAATGTGAAACCGAAAAAAGATTGGCGAAAGATTCGATTTGCTCTCAAATGGTTCATGCTGTATAGAACTAGAAAGAGGGACGAATTTTTGTTCATATATACTCCCTGA 1419 0.3975 MASKRTSQSHDEDSTKDLHVPSTSSTTKRIKHCNPEQEIQQQNPLFPTTMTRSATNHNNIIAFYFEPLIRKVMLEVIPPMLDRYLAPSCGLTFNGRAKPYGRRGLQLCFKNNLPQKNYTQSKIEAKGGGPLRIELRDAENQRIVRDEGSSMKIQICVLQGDFEKEDWTAEEFDKQILGAKIVRSNSIGSDIREGRSEPFRVLDVRGKAYKKHDRPSMNDEVWRLRGIGKNGKLHAELRLHGIKSVKDLLQLYKTNEASLREKIGKIAEKSWNTIIAHVKECEVDDDDDDDDDDDDDDDDEERVKQEMSIDTTKHGLVETSTGVQTAQYGGLDQSLQQFHFPFPQQEMWTSTSISQSDQIGSEFYNQMLAMGDMQPYLSGEGNMISEAYNFDGASQISQFGSYSLEQVNANHLPFVYSDGAGPSNHSSSLNFAVHISSNVKPKKDWRKIRFALKWFMLYRTRKRDEFLFIYTP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04818 472 MobiDBLite consensus disorder prediction 282 303 - -
Trre14g04818 472 Pfam Calmodulin binding protein central domain 217 281 IPR046830 -
Trre14g04818 472 PANTHER OS02G0177800 PROTEIN 25 176 IPR012416 GO:0005516
Trre14g04818 472 MobiDBLite consensus disorder prediction 19 34 - -
Trre14g04818 472 Pfam Calmodulin binding protein-like N-terminal domain 105 177 IPR046831 -
Trre14g04818 472 MobiDBLite consensus disorder prediction 282 311 - -
Trre14g04818 472 MobiDBLite consensus disorder prediction 1 34 - -
Trre14g04818 472 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04818 Trre-Chr14 55420883 55423821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04818 58 287 Calmodulin-binding Proteins AT5G26920 33.700 1.27e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04818 - - tpra:123890981 533.872