Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04806 ATGTTTCTTATTCAATTAGCTTATGCAGGAATGAATATTACCTCAAAGCTTGCTATTCTAGGTGGCATGAACCCTCTTATCCTTGTTGCTTATCGTCAAATCTTTGGAACTATAGCCATTGCTCCCTTTGCATATTTTCTTGAACGGGATATGGTTCCAAGGATGACAAAGCGCATTATGGTTCAGATTTTAATATCTTCCTTAACAGGAGTAACAGGAAATCAGGTTCTATATTTCGTTGGTCTAAAGTATGCATCAGCAACAGTTGCATGTGCACTCACCAATTTACTCCCAGCATTTACATTTGTCCTTGCAATCTTATTCAGACAAGAGAGTTTGGGAATAAAAAGGAAGAGTGGTATAGCAAAGGTAGTAGGAACAGCTTTGTGTGTTGGTGGAGCAATATTTTTATCATTTTACCATGGAGAAGCGATTGGTATTGGAGACTCAAAAATTCATTGGAGTTATGCTGATAAAATTGAAGGTGGTGATACTTCCACTGCTGCTTCCCGTACCACACTTATAGGCCCTATTGCCTTAAGTCTTAGTGCTCTTATTTGGGCAGCATGGTTTATACTTCAAGCAGATATGAGCAGGAATTTTCCAGTACCTTATACAAGCACAGCATACATGTTATTCTTAGCAAGTTTTCAATGTGTGATCATTGCATTGTTTTTTGATCATAGTGTCTCATCTTGGTCACTTGTTGATGCTATGAGACTTACCTCTTCTCTTTATGCGGGAGTAATTTGCACTGGGCTGACATATTGTATAATATCATGGACCATTGAGAGAAAAGGGCCTGTTTATGTCTCTGTATTTAGCCCCATGCAGCTTATCATCACAGCTGTCATTAGTTGGGCTTTTCTCAGGGAGAAATTATACCTTGGAACGGCCATAGGGTCTGTTCTGATAGTTGGTGGGCTATATGCTGTTTTGTGGGGAAAGAGCAAAGAGGTGGATAGCAACAAAGTGGACGATGCTACTGATGATGATGATGATGAAGCATTGCCACAAGGAATTAAGAAGAATGATATGGAATTGCAATCTTATATACCATCCAATGGTAACGGCCACATATGA 1083 0.3934 MFLIQLAYAGMNITSKLAILGGMNPLILVAYRQIFGTIAIAPFAYFLERDMVPRMTKRIMVQILISSLTGVTGNQVLYFVGLKYASATVACALTNLLPAFTFVLAILFRQESLGIKRKSGIAKVVGTALCVGGAIFLSFYHGEAIGIGDSKIHWSYADKIEGGDTSTAASRTTLIGPIALSLSALIWAAWFILQADMSRNFPVPYTSTAYMLFLASFQCVIIALFFDHSVSSWSLVDAMRLTSSLYAGVICTGLTYCIISWTIERKGPVYVSVFSPMQLIITAVISWAFLREKLYLGTAIGSVLIVGGLYAVLWGKSKEVDSNKVDDATDDDDDEALPQGIKKNDMELQSYIPSNGNGHI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04806 360 Pfam EamA-like transporter family 175 313 IPR000620 GO:0016020
Trre14g04806 360 Pfam EamA-like transporter family 3 136 IPR000620 GO:0016020
Trre14g04806 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 139 - -
Trre14g04806 360 PANTHER WAT1-RELATED PROTEIN 1 320 IPR030184 GO:0016020|GO:0022857
Trre14g04806 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 210 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04806 Trre-Chr14 55338912 55343020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04806 1 358 Nodulin-like Gene Family AT1G09380 53.243 2.38e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04806 - - gmx:100801512 487.648