Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04805 ATGGCAAGTGCTGCTAGTTTCATTCCATTAATATTAATGTTTCTTATTCAATTAGCTTATGCAGGAATGAATATTACCTCAAAGCTTGCTATTCTAGGTGGCATGAACCCTCTTATCCTTGTTGCTTATCGTCAAATCTTTGGAACTATAGCCATTGCTCCCTTTGCATATTTTCTTGAACGGGATATGGTTCCAAGGATGACAAAGCGCATTATGGTTCAGATTTTAATATCTTCCTTAACAGGAGTAACAGGAAATCAGGTTCTATATTTCGTTGGTCTAAAGTATGCATCAGCAACAGTTGCATGTGCACTCACCAATTTACTCCCAGCATTTACATTTGTCCTTGCAATCTTATTCAGACAAGAGAGTTTGGGAATAAAAAGGAAGAGTGGTATAGCAAAGGTAGTAGGAACAGCTTTGTGTGTTGGTGGAGCAATATTTTTATCATTTTACCATGGAGAAGCGATTGGTATTGGAGACTCAAAAATTCATTGGAGTTATGCTGATAAAATTGAAGGTGGTGATACTTCCACTGCTGCTTCCCGTACCACACTTATAGGCCCTATTGCCTTAAGTCTTAGTGCTCTTATTTGGGCAGCATGGTTTATACTTCAAGCAGATATGAGCAGGAATTTTCCAGTACCTTATACAAGCACAGCATACATGTTATTCTTAGCAAGTTTTCAATGTGTGATCATTGCATTGTTTTTTGATCATAGTGTCTCATCTTGGTCACTTGTTGATGCTATGAGACTTACCTCTTCTCTTTATGCGGGAGTAATTTGCACTGGGCTGACATATTGTATAATATCATGGACCATTGAGAGAAAAGGGCCTGTTTATGTCTCTGTATTTAGCCCCATGCAGCTTATCATCACAGCTGTCATTAGTTGGGCTTTTCTCAGGGAGAAATTATACCTTGGAACGGCCATAGGGTCTGTTCTGATAGTTGGTGGGCTATATGCTGTTTTGTGGGGAAAGAGCAAAGAGGTGGATAGCAACAAAGTGGACGATGCTACTGATGATGATGATGATGAAGCATTGCCACAAGGAATTAAGAAGAATGATATGGAATTGCAATCTTATATACCATCCAATGGTAACGGCCACATATGA 1119 0.3914 MASAASFIPLILMFLIQLAYAGMNITSKLAILGGMNPLILVAYRQIFGTIAIAPFAYFLERDMVPRMTKRIMVQILISSLTGVTGNQVLYFVGLKYASATVACALTNLLPAFTFVLAILFRQESLGIKRKSGIAKVVGTALCVGGAIFLSFYHGEAIGIGDSKIHWSYADKIEGGDTSTAASRTTLIGPIALSLSALIWAAWFILQADMSRNFPVPYTSTAYMLFLASFQCVIIALFFDHSVSSWSLVDAMRLTSSLYAGVICTGLTYCIISWTIERKGPVYVSVFSPMQLIITAVISWAFLREKLYLGTAIGSVLIVGGLYAVLWGKSKEVDSNKVDDATDDDDDEALPQGIKKNDMELQSYIPSNGNGHI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04805 372 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020
Trre14g04805 372 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Trre14g04805 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
Trre14g04805 372 PANTHER WAT1-RELATED PROTEIN 9 332 IPR030184 GO:0016020|GO:0022857
Trre14g04805 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04805 Trre-Chr14 55338876 55343020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04805 8 370 Nodulin-like Gene Family AT1G09380 52.800 1.40e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04805 - - gmx:100801512 492.271