Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04749 ATGGCGTCTTCATTCTCAACCCATTTGCTTCAATCTCAAATCCATCTCCAGGGTAATTTTAGCCAACATGTGTCTATGGTTACAAAGTCACATACCATATCAAAGATTGGTTATACTAAATCACTGCCATTAAGATCAAATTTTGGTTTGATGTTTTCAACCACGCAACAATCTGGACCAAGATCAATTACACACAGGAGAGTCACATGTGCTGCTGCTGCTGCTGAAAATGTTCAAGAGCTGCAAGCCAAAGTGACTACCAAATGTTTCTTTGATGTAGAAATTGGGGGTAAATCTGTTGGCCGGATTGTTTTGGGTTTGTTCGGAGAGGTTGCTCCTAAAACAGTTGATAATTTCCGTGCTTTGTGCACAGGAGAGAAAGGATATGGTTACCAAGGATGCTCCTTCCATCGTATAATCAAAGATTTCATGCTTCAAGGAGGTGACTTCACTGCAGGAGATGGAACCGGTGGAAAAAGTATCTATGGTTCTAATTTTGAAGATGAGACTTTTGCCTTGAAACATGTTGGTCCTGGAGTTTTGAGTATGGCAAATGTTGGTCCTAATACTAATGGTAGTCAATTTTTTATTTGCACTATAAAGACTCCATGGTTAGACAATCGACATGTTGTGTTTGGACATGTGATTGATGGAATGGATGTTGTGAGGACACTTGAATCTCAGGAAACAAGCAGATTAGATATCCCTAAAAAGCCTTGCAGAATTGTTAAGTGCGGAGAACTGCCTTTAGATGATTGA 759 0.3979 MASSFSTHLLQSQIHLQGNFSQHVSMVTKSHTISKIGYTKSLPLRSNFGLMFSTTQQSGPRSITHRRVTCAAAAAENVQELQAKVTTKCFFDVEIGGKSVGRIVLGLFGEVAPKTVDNFRALCTGEKGYGYQGCSFHRIIKDFMLQGGDFTAGDGTGGKSIYGSNFEDETFALKHVGPGVLSMANVGPNTNGSQFFICTIKTPWLDNRHVVFGHVIDGMDVVRTLESQETSRLDIPKKPCRIVKCGELPLDD 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04749 252 FunFam Peptidyl-prolyl cis-trans isomerase 74 252 - -
Trre14g04749 252 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 88 248 - -
Trre14g04749 252 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 131 148 IPR020892 GO:0003755|GO:0006457
Trre14g04749 252 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 91 246 IPR002130 GO:0000413|GO:0003755
Trre14g04749 252 CDD cyclophilin_ABH_like 88 246 - -
Trre14g04749 252 SUPERFAMILY Cyclophilin-like 84 248 IPR029000 -
Trre14g04749 252 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Trre14g04749 252 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 194 206 IPR002130 GO:0000413|GO:0003755
Trre14g04749 252 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 148 IPR002130 GO:0000413|GO:0003755
Trre14g04749 252 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 194 IPR002130 GO:0000413|GO:0003755
Trre14g04749 252 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 207 222 IPR002130 GO:0000413|GO:0003755
Trre14g04749 252 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 90 247 IPR002130 GO:0000413|GO:0003755
Trre14g04749 252 Gene3D - 72 251 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04749 Trre-Chr14 54878920 54881119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04749 101 245 U-box Gene Family AT5G67530 43.151 2.46e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04749 K03768 - gmx:100785805 370.548