Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04748 ATGAAGCTGATTCTCATAATAACGTTTTCTCTTATTATCTCAGTTATTAGATCTGAGACTCACACTCACACACACTATCTCTCTCCTAAGTATATCTTGGAAAACGATGTCGTTTCACTTCCAGATGCAGCTGCAGCAGCTCCACAACCTCAACCTCTCATGGTGCCACTCACTCTTATTCATGGAGCTGATTCTAAAGGAGCAGTATGTTTGGATGGAACATTACCTGGTTACCACTTCCATCCTGGATCTGGATCGGGTGCAAATAGTTGGCTCATTCAATTAGAGGGAGGAGGATGGTGTAACACCATCAGAAGTTGTGTCTTTAGAAAAACTACTCGTCGTGGTTCCTCAAACCACATGGAAAAGCAACTACCATTCACAGGGATACTGAGCAATAAAGCTGAAGAAAATCCTGATTTCTTTAACTGGAACAGAATCAAAGTGCGTTACTGCGATGGGGCATCTTTCAGTGGAGACAGTCAAAATGAGGCCGCACAACTTCAATTTAGAGGACAAAAAATATGGCTAGCTGCAATGGAAGAATTATTGTCCAAGGGAATGAAGAATGCCAATCAGGCTCTTTTATCTGGATGCTCTGCGGGTGGTCTGGCATCTATACTACATTGTGACGAGTTCCGCAGCTTGCTTCCAAAATCTACCAAAGTGAAGTGTTTAAGTGATGCGGGATTTTTTCTCGATGCAACTGATGTCTCTGGCGGGCACACATTGAGGAATCTGTTTGGAGGCGTAGTTAACTTACAGGAAGTGCAAAAAAATCTGCCAAAAAGTTGTCTCAGCAACCTGGACCCAATTTCGTGCTTCTTTCCTCAAAATTTGATCAATCATGTTCAGACTCCACTGTTTCTGCTGAATGCAGCTTATGATGCATGGCAGCTCCAAGAAAGTTTAGCCCCGCCTTCAGCAGATCCTCATGGCTCTTGGAATAATTGTAAATCAAATCATGCAAATTGTAACTCAGCCCAAATTCAGACCCTCCAAAACTTCAGAAACCAAATGCTAAATTACATGAAAGGATTCTCAACAACATCTCAATCTGGATTATTCATAAATTCTTGTTTTGCACATTGCCAATCGGAGAGACAAGACACATGGTTTGCTGATGACTCTCCGCTCCTTAACAACATGCCAATTGCTATTGCCGTTGGAAATTGGTTTTTCGATCGTCAAGTTGTCAAAGCTATTGACTGTGCTTACCCCTGTGACAATACCTGCCATAATCTGGTCTTCAATGTTGGTAGATCTTCTGTGGTGGACTCTCAGTCCACAAGTGATGATATTCCTACCAACATGCTATATTCACGCTCGACAAAGTTGACGTTTAGTGCTGGCTTACTTGTACTAAGTGCTTTATTGCCAATTACATGCTCCTAA 1395 0.4215 MKLILIITFSLIISVIRSETHTHTHYLSPKYILENDVVSLPDAAAAAPQPQPLMVPLTLIHGADSKGAVCLDGTLPGYHFHPGSGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSNHMEKQLPFTGILSNKAEENPDFFNWNRIKVRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELLSKGMKNANQALLSGCSAGGLASILHCDEFRSLLPKSTKVKCLSDAGFFLDATDVSGGHTLRNLFGGVVNLQEVQKNLPKSCLSNLDPISCFFPQNLINHVQTPLFLLNAAYDAWQLQESLAPPSADPHGSWNNCKSNHANCNSAQIQTLQNFRNQMLNYMKGFSTTSQSGLFINSCFAHCQSERQDTWFADDSPLLNNMPIAIAVGNWFFDRQVVKAIDCAYPCDNTCHNLVFNVGRSSVVDSQSTSDDIPTNMLYSRSTKLTFSAGLLVLSALLPITCS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04748 464 PANTHER NOTUM-RELATED 53 414 IPR004963 GO:0016787
Trre14g04748 464 Pfam Pectinacetylesterase 50 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04748 Trre-Chr14 54871466 54876356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04748 35 418 Carbohydrate Esterase AT2G46930 70.130 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04748 K19882 - gmx:100785270 761.14