Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04730 ATGGAAAACCAACCCTTTCTTCTAACCAACCGTCAAAATTCACCCTTCACTTCTTCCAAATCCTTCAACGACTTCACCACCTTACAACCACCACCACCACCACCACCACCACCATCATCATCAGAAATTCAATCCTGCAACATCACTCCACAACAACAACAACAACAACAACAACCATTTTCAGTTTCACCTCCTAAACATAAAAAACTCAGCCGCTGTAAAACAGCACCAGCCATGTTCATTCTTTCAAACCTTAAACCACAAAACAACAACAACCAACCTCAACTTCCCAAACCACAAACAAATTCCATTATCAGACAAGGCATTTGGCTTCTCTTAATCTATCTTTCTATCGGTGTCACTATTTACTCTTTCAACACAAAAAAATTCTCTGGCATTGAAACTCACCCTGTTGTGGATGCACTTTATTTTTGTATAGTTACCATGTGTACAATTGGTTATGGAGACATAGCTCCATTAACCCCTTTTACTAAAGTTTTTGCTTGTGTTTTTGTTTTAGTTGGTTTTGGATTCATAGATATACTCTTAAGTGGACTTGTTAATTTTGTTTTGGATTTACAAGAAAACACGATTTTAACCGGCTTTCAAATGGGTGCTAGGGAAGGTTTTTCTGCTAGGGATTATATTGTTGATGTTGCAAAAGGTAGAATGAGGATTAGATTGAAGGTTGGTTTGGCTCTTGGTGTTGTGGTTTTGTGTATTGGTGTTGGGAGTTTGGTTTTGTGTTTTGTTGAGGATTTGAATTGGGTTGATTCGATTTATTTAGCGGTTATGTCTGTTACAACGGTTGGTTATGGAGATCAAGCTTTTAAGACGCTTCCGGGGAGATTGTTTGCTGCAATTTGGTTGTTGTTTTCTACTTTGATGGTTGCTAGGGCTTTTCTTTATTTGGCTGAGGCTAGAATTGATAGAAGACATAGGAGATTGGCTAAGAAGGTTTTGCATAGAGAAATTACTATTGAAGATTGGCTTGCTGCTGATATCAACAATACCGGTTTTATCAGTAAGTCAGAATATATGATCTTCAAGCTGAAAGAGATGGGAAAAATACAAGATAAAGATGTAATGGAAATTTGTGATCAATTCAGGAGGCTTGATCCTTCTAATTGTGGGCATATAACATTACCTCATCTCTTGGAGGGTAGGTCATGA 1173 0.3777 MENQPFLLTNRQNSPFTSSKSFNDFTTLQPPPPPPPPPSSSEIQSCNITPQQQQQQQQPFSVSPPKHKKLSRCKTAPAMFILSNLKPQNNNNQPQLPKPQTNSIIRQGIWLLLIYLSIGVTIYSFNTKKFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKVFACVFVLVGFGFIDILLSGLVNFVLDLQENTILTGFQMGAREGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIGVGSLVLCFVEDLNWVDSIYLAVMSVTTVGYGDQAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRLAKKVLHREITIEDWLAADINNTGFISKSEYMIFKLKEMGKIQDKDVMEICDQFRRLDPSNCGHITLPHLLEGRS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04730 390 PRINTS Two pore domain K+ channel signature 147 175 IPR003280 GO:0005267|GO:0016020|GO:0071805
Trre14g04730 390 PRINTS Two pore domain K+ channel signature 268 277 IPR003280 GO:0005267|GO:0016020|GO:0071805
Trre14g04730 390 MobiDBLite consensus disorder prediction 42 64 - -
Trre14g04730 390 Gene3D - 91 200 - -
Trre14g04730 390 Gene3D - 214 333 - -
Trre14g04730 390 Pfam Ion channel 237 306 IPR013099 -
Trre14g04730 390 Pfam Ion channel 111 190 IPR013099 -
Trre14g04730 390 ProSitePatterns EF-hand calcium-binding domain. 334 346 IPR018247 -
Trre14g04730 390 FunFam Two-pore potassium channel 3 213 327 - -
Trre14g04730 390 SUPERFAMILY EF-hand 330 385 IPR011992 -
Trre14g04730 390 SUPERFAMILY Voltage-gated potassium channels 104 190 - -
Trre14g04730 390 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 138 364 IPR003280 GO:0005267|GO:0016020|GO:0071805
Trre14g04730 390 MobiDBLite consensus disorder prediction 1 26 - -
Trre14g04730 390 SUPERFAMILY Voltage-gated potassium channels 220 328 - -
Trre14g04730 390 MobiDBLite consensus disorder prediction 1 68 - -
Trre14g04730 390 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04730 Trre-Chr14 54746485 54748834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04730 68 386 Ion Channels AT4G01840 66.769 2.14e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04730 K05389 - gmx:100801488 564.303