Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04724 ATGTCAGGAAAGATAATTATATCTGTTGTTTCTCTTATCCTTGTTGTAGGTGTTGCCATTGGTGTTGTTGTAGCTGTTCACAAAAAAGGTGAAGATCCTGAGATTCAAACTGAACAAAGATATCTTAGAGTTATTTGCCAAAATGCAGAAGATCAAAAACTCTGCCATGAAACTCTTAGCAATGTCCGTGGCGCCGACGCTTCAGATCCCAAGGCATACATAGCGGTTGCAGTGAAAGCAGCCACTGAAAATGTCATTAGAGCATTTAACATGAGTGATAGACTCATTGTTGAGTACGGAGACAAGGATAGGCGCATCAAGAGGGCTCTTCATGTCTGCAAAGAAATGATGGAGTTTGCTTTGGACAGTCTTGATCTCTCCACCATTGTGGTTCGTGACAACAACATTCAATCTGTTCATGCTCAAAATGCTGATCTCAGGAATTGGTTGAGTGCAGTTATCTCTTACAAACAAGCTTGCATGGAAGGATTTGACGATGAAAAAGAGGCTGAGAAGAATATTAAGGATCAATTTCATGCTCAGACTATAGACCGCGCGACAAAGGTCACCGTTGTTGCTCTTGACATTGTGTCTGATTTATCCAACATACTCCAAGAATTCGGTTTGAAATTGGATCTCAAACCTGCCTCTCGTCGTCTTCTATCTGAGGAGATTGATAATGAGGAAGGATACCCTACATGGGTCTCTGCTACTGACCGCAAGCTTTTGGCTAAAATGAAAAGAAAAGGATGGAGATCAAAAATTACGCCTAATGTTATTGTTGCCAAGGATGGTACTGGCCAATTTAAAACCATTATGGAAGCTCTTGCTGCTTACCCTAAGGGATACAAAGGAAGATATTTTATGTACGTTAAGGCTGGTGTCTATGAAGAGTACATCATTGTCCCCAAAGATTGCGTTAACTTGCTTATGTACGGTGATGGCCCTCAAAAGACCGTTATCACCGGTCATAAGAACAAAGGCAAGGATAATATTGATATCGTGGATAGCGCAAGCTTTGCCAACAACGCAATTGGGTTCATTGCAAGGGCAATGAAATTTGAGAACACAGCCGGTCCTGATGGTAAACAAGCTGTTGCTTTGAGAAACCTAGGAGATATGGCTGCTTTTGTTGGTTGTGATATCGTAGGTTACCAAGACACCTTGTACGCTCAATCCAACAGGCAATTCTACCGTGACTGTAATATTTATGGTACCATCGATTTCATCTTTGGAACAGCTCGCACCTTGATCCAACACTCTACGATCACCGTAAGGAAGCCCAAGAACGATCAATTCAACGCAATTACCGCGGACGGATCAGAAGATTCTAAGAACTTGTACGCTGGTATTGTGATCCAGGACTGCAAGATCGTGCCAGACATAGAATTGGAACCTGTAAGGTTCCAAATCAGATCTTACTTGGGCAGGCCATGGAAGAGATATGCAAAGACAGTCTTCATGGAATCCAACATCGGTGACTTTATTCATCCAGACGGATGGGAGCCTTGGAAGCGTGATAATTTGGACACATGTTACTTAGCAGAGTATAACAACACTGGACGCAGTGCCGATATTTCCAGAAGGGTCAAGTGGAAGGGTTATCACGGTGCCATTAGCCAGGCCGATGCTATACAATTCACCGCTGGTCAATGGCTCAAGGCTGGAACCGAATCCGCACCCCTATCCGTAACCGAGTGGTTTAAGGGTTTTAAGGGTCTTCATATTATTCACTACCTTGGCTTCAAACCTTGA 1755 0.4313 MSGKIIISVVSLILVVGVAIGVVVAVHKKGEDPEIQTEQRYLRVICQNAEDQKLCHETLSNVRGADASDPKAYIAVAVKAATENVIRAFNMSDRLIVEYGDKDRRIKRALHVCKEMMEFALDSLDLSTIVVRDNNIQSVHAQNADLRNWLSAVISYKQACMEGFDDEKEAEKNIKDQFHAQTIDRATKVTVVALDIVSDLSNILQEFGLKLDLKPASRRLLSEEIDNEEGYPTWVSATDRKLLAKMKRKGWRSKITPNVIVAKDGTGQFKTIMEALAAYPKGYKGRYFMYVKAGVYEEYIIVPKDCVNLLMYGDGPQKTVITGHKNKGKDNIDIVDSASFANNAIGFIARAMKFENTAGPDGKQAVALRNLGDMAAFVGCDIVGYQDTLYAQSNRQFYRDCNIYGTIDFIFGTARTLIQHSTITVRKPKNDQFNAITADGSEDSKNLYAGIVIQDCKIVPDIELEPVRFQIRSYLGRPWKRYAKTVFMESNIGDFIHPDGWEPWKRDNLDTCYLAEYNNTGRSADISRRVKWKGYHGAISQADAIQFTAGQWLKAGTESAPLSVTEWFKGFKGLHIIHYLGFKP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04724 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 201 IPR035513 -
Trre14g04724 584 Pfam Plant invertase/pectin methylesterase inhibitor 43 196 IPR006501 GO:0004857
Trre14g04724 584 PANTHER PECTINESTERASE 13 569 - -
Trre14g04724 584 NCBIfam pectinesterase inhibitor domain 10 173 IPR006501 GO:0004857
Trre14g04724 584 FunFam Pectinesterase 38 201 - -
Trre14g04724 584 SUPERFAMILY Pectin lyase-like 255 555 IPR011050 -
Trre14g04724 584 CDD PMEI-like_3 45 202 - -
Trre14g04724 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 200 IPR035513 -
Trre14g04724 584 Gene3D - 252 565 IPR012334 -
Trre14g04724 584 Pfam Pectinesterase 258 554 IPR000070 GO:0030599|GO:0042545
Trre14g04724 584 FunFam Pectinesterase 4 255 564 - -
Trre14g04724 584 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Trre14g04724 584 SMART PMEI_2 37 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04724 Trre-Chr14 54724682 54726520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04724 1 553 Carbohydrate Esterase AT2G47030 37.736 4.80e-121 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04724 K01051 - gmx:100781507 704.131