Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04708 ATGGAGAACTCGGATGAATATATTGATGTTGATTCCAACGAGGTTCATTCCACTGATGATGATACAGCTGGTGTTAAATTGAATGATGAAGAGGACGACATTTATTCTGTATCAAGTGGGTCTGAAAGTTCAAATGATAGCGATGATGCTGACAAAGGCAATGATGATAAACCGGTTGAAGTAGATGCAGTCGTAGGTGATAGAGTGGTAAATGTAAATTCAATTACTTCTGATGAAATTTTTGCTTTGGAATTTGGTACTGTTGATGAAGCGTTTGAATTTTATTATCGGTATGGTAAATGTAAAGGTTTTGCCGCTAGGAAAAGTGATAGGAGAAAAGACCCAAAAGGCAGTAAAAAACTAGTGATGAGGCAGTTTGTATGCAACAAACATGGGTACCGAGATAAGAAACACTTGTGCAAGACAGATAGGAAAAGAGAGCATAGACGTTTGACCCGTACTGGTTGCACTGCTAGGCTTCGTGTGCAATACAAACCCAAAAAGGATAGATATGTAGTGTCAATTTTTGAAGAGGGTCATAACCATGAATTAACCCCTTCTAAGTATGTGCACTTACACCCCATTTATCGACAAATTTCTGAAGCCGATAGAGCTCAGATTGATGGTCTTCAGTCACACGGATTTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGATATGCCGATGTGAAGTCGTCTACTGATGCTATGCTATATGCTGAATATGCTGTCAACGAGAGTGATGGACGAATGAAGTCTCTTTTTTGGGCTGATGGGGCGGAGATTTTCAAAGAAGTTAAAGAGCAAATTACGAAGGCTGGTGCATTGATTGTTAAGGATAAGCATGTAAATGGGGATACGAAGGTTTATACATTGACAAAATATTGTAAGGATAATTATGAAAGAGAGGTTGTTTATGATGGTTCAACATTGAATTGTTCGTGTAAGTTATTTGATTCTCGTGGCCTTCCATGTTCGCATATTTTTTATGTGATGAAGGAAGAACATGTTGATCACATTCCTAGAAGTTTGGTTTTGCCGCGCTGGACCAAGGATGCAAAAATTGAATATTTGACCAATGATGGTAATGGTACAGTTGATTCGAATATGATGGTGCTTGCTCGTTTTGGTGCATATTGTTCTGTTTTTACTAATTTTTGCAAAGAAGTATCTAAAAAGGATGGTGTTTATGAGGAAGTAATAGATGACATAATGAATTTACAAAAAAAGTATTGCAGTACTGATGATCCTATTGGGACACAAAAGTCGACTGTACGTGATCCAGTTCCGGTGAAGGGTAGAGGTGCTCCAAAGAAAAGAAAGACCGACACCAAAACTATTAGGCGTGGTGGCAGATGCGATAATACAACTCATAATGCGAGAAGTTGTTCGCGTGCTAAAAAAGCACCAGTTGGAAAAAATGTTAAGTTGGATTCAATGTCATTAACTGATTTTGTAAGCCAAACTGAGAAGAACAAGAAAAGAAAAACAAGTTGCAAGGGTGAACCAAGCGTGCAAAAGAATTGTTCAGATGGACCGCAAAATCGTGGCGATAATGTTACAATGAGACAAATTCCTTCAATGTATGCAGTTCAACCTATGATGCCTGTGATACATCCGGGAGGTCATCCGATGCAAGTGCAACCCGTGTATCCAATATATGGAATGCCCGTTGGTGAAAATTCAAATTCGTGTTTCGGCCTCCTACAACAAGTGATGAAATCTGCTGGTAAAGAATGA 1752 0.3893 MENSDEYIDVDSNEVHSTDDDTAGVKLNDEEDDIYSVSSGSESSNDSDDADKGNDDKPVEVDAVVGDRVVNVNSITSDEIFALEFGTVDEAFEFYYRYGKCKGFAARKSDRRKDPKGSKKLVMRQFVCNKHGYRDKKHLCKTDRKREHRRLTRTGCTARLRVQYKPKKDRYVVSIFEEGHNHELTPSKYVHLHPIYRQISEADRAQIDGLQSHGFRTCHIMGYMVAQKGGYADVKSSTDAMLYAEYAVNESDGRMKSLFWADGAEIFKEVKEQITKAGALIVKDKHVNGDTKVYTLTKYCKDNYEREVVYDGSTLNCSCKLFDSRGLPCSHIFYVMKEEHVDHIPRSLVLPRWTKDAKIEYLTNDGNGTVDSNMMVLARFGAYCSVFTNFCKEVSKKDGVYEEVIDDIMNLQKKYCSTDDPIGTQKSTVRDPVPVKGRGAPKKRKTDTKTIRRGGRCDNTTHNARSCSRAKKAPVGKNVKLDSMSLTDFVSQTEKNKKRKTSCKGEPSVQKNCSDGPQNRGDNVTMRQIPSMYAVQPMMPVIHPGGHPMQVQPVYPIYGMPVGENSNSCFGLLQQVMKSAGKE 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04708 583 PANTHER OS01G0519700 PROTEIN 79 235 - -
Trre14g04708 583 MobiDBLite consensus disorder prediction 1 58 - -
Trre14g04708 583 Pfam FAR1 DNA-binding domain 93 185 IPR004330 -
Trre14g04708 583 MobiDBLite consensus disorder prediction 506 521 - -
Trre14g04708 583 MobiDBLite consensus disorder prediction 491 521 - -
Trre14g04708 583 MobiDBLite consensus disorder prediction 422 475 - -
Trre14g04708 583 Pfam SWIM zinc finger 310 332 IPR007527 GO:0008270
Trre14g04708 583 ProSiteProfiles Zinc finger SWIM-type profile. 304 340 IPR007527 GO:0008270
Trre14g04708 583 SMART 26again6 315 342 IPR006564 GO:0008270
Trre14g04708 583 MobiDBLite consensus disorder prediction 9 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04708 Trre-Chr14 54631877 54634653 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre14g04708 FAR1 2.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04708 - - tpra:123919501 385.185