Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04666 ATGGATAGTTCAAATAATATGGTGGATTCTGGTGGTATTCTTCATGAATTTATAGAAGTTGACAAGTTTAAAGATGATGGTGTCGGCGTCGCATGTTGGGAGCCTGCAATGGATATGTGTTTTTCTTCTATGGATGATGCTAAATCTTTTTATGCAGAGTATGCTTTGAGAAAGGGGTTTGGGTGGAGGATTAGATCATCAAAAAAAGGACCGGATGGAGAAATATGCTACATTATTCTAGCATGCTCAAGAGAGGGGTCTAATGTCTCAAAGGTTCCACCTACATTGAAGACACTTCCGACAAGGGTGAACTACTGTCCTGCTAAGATTTGTATTAAGATGGAAAAAGATGGATTGTGGTACTTCAAAAAATTTAATCCCGACCATTCTCACGAGATCATCCCTACAAAGGCAAGGCTGTTCAAGGCTAGCAAGAAAATGAAGAGGACTATTGAAATCAATGATGATGCGGGTGGGCATGAAAATATATTGCTTTGTGGAAGAGACATGGAGAATTATGTTAACCAGGAACGTCGTGCAATTGGAAAAGAAGATTTAGATGACGATTTTCATGTGAAAAATGTGTTTTGGGCTGATGCAAGAACCGTTGAGTCTGAAGTTGTAACTAAGGCGCTCCATGAAACATTACATCAGTTCCATTCTAATTTGCCTCATTTGATGGAGATGTAA 690 0.3913 MDSSNNMVDSGGILHEFIEVDKFKDDGVGVACWEPAMDMCFSSMDDAKSFYAEYALRKGFGWRIRSSKKGPDGEICYIILACSREGSNVSKVPPTLKTLPTRVNYCPAKICIKMEKDGLWYFKKFNPDHSHEIIPTKARLFKASKKMKRTIEINDDAGGHENILLCGRDMENYVNQERRAIGKEDLDDDFHVKNVFWADARTVESEVVTKALHETLHQFHSNLPHLMEM 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04666 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 159 - -
Trre14g04666 229 Pfam FAR1 DNA-binding domain 49 134 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04666 Trre-Chr14 54313462 54315378 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre14g04666 FAR1 8.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04666 - - cam:101513893 268.47