Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04665 ATGGCTAGCTTCGCCGCTGCATCCCTCCAACTTGAGTCAGAAGCATCTAATTCAGACCTCAAACAAGAATCTCAAGCATTCAAGAAGCGTAAAATGGTTGAGAAAACAGTTGTAACTGTAAGAATAGGAGAGAATGTTAGCAAGCTGAAGAATGAAGGGCTTCCTTCAGATTTTTGGTCATGGAGGAAATATGGACAAAAGCCAATCAAAGGATCTCCATATCCAAGGGGATATTATAGGTGCAGCACAACAAAGGGTTGTTCAGCCAAAAAGCAAGTAGAGAGAAGTAGCACAGATGCTTCAATGCTCATCATCACCTATACTTCAAAACACAACCATCCAGATCCTACTGCCTTCTCCGCCACAAACTCAGCTCAACAACCAAAAGAGTCCGAAACCGAAACAATCCCGGTTACCTCCAATGAAGAAGACCAAGAACATTTCGTCGAGGAAATGATTAATAATAACAGCATTGTTACTAGTACTGATCAAGTTACTAATGATGAAAATTTTCATTACTTGCAATCTCCAATACACTGCTCTGAGGAGATTATTATAGACCAAGAAGATCCTTTCAAACTGAACATAGAAAAAAACCATATTGACAAAATAGATATTCTCTTAGAAGAAGAGCCACTCTGCTATGCACAGTTAAGAAATTTGACAGAATCTAAATCAGAAGAACTTGATTTTTTCGATGAGCTTGAGGAGTTACCTATGTCTTCATCTATTTTACATTTTACTAGGAACATTTTTTCTGATGAAAGGATTCCTGTTGCTCCTTCTTGA 789 0.3828 MASFAAASLQLESEASNSDLKQESQAFKKRKMVEKTVVTVRIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTTKGCSAKKQVERSSTDASMLIITYTSKHNHPDPTAFSATNSAQQPKESETETIPVTSNEEDQEHFVEEMINNNSIVTSTDQVTNDENFHYLQSPIHCSEEIIIDQEDPFKLNIEKNHIDKIDILLEEEPLCYAQLRNLTESKSEELDFFDELEELPMSSSILHFTRNIFSDERIPVAPS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04665 262 FunFam WRKY transcription factor 65 38 116 - -
Trre14g04665 262 MobiDBLite consensus disorder prediction 113 135 - -
Trre14g04665 262 SUPERFAMILY WRKY DNA-binding domain 52 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g04665 262 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g04665 262 Gene3D WRKY domain 41 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g04665 262 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 242 IPR044810 GO:0003700
Trre14g04665 262 MobiDBLite consensus disorder prediction 1 27 - -
Trre14g04665 262 MobiDBLite consensus disorder prediction 113 143 - -
Trre14g04665 262 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g04665 262 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04665 Trre-Chr14 54309072 54311128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04665 3 244 WRKY Transcription Factor Family AT4G01250 36.475 1.29e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g04665 WRKY 6.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04665 - - gmx:100127368 371.318