Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04663 ATGGAAATCAATCATTTTTCTTCCACTCATCACTCTCTAGAACAACTTCTGTTCCAAGAGATTCATAATAGTAATAATCAGAAACAACAAGAACAAGAATTCGAAGTTGTTGATAATAACTTCATGTCACTAGAAGATATAAACTTCAACCATTGTCAACAAAACAATCATCAAAACAAAGTTTCAATTCCAAAACCTTTACAAAACAAGATGCCATTGTCTTTATCATCTTTAGAGATTCTGAGAAATCATGGAAGTAGATTCAACAAGAAAAATATAGTCACTAAAACTTCTTCAAATTTGGAACATCATCGAATGATGTCAACAGAAGAAATAATAAGAGTAGCTGGAGCAAGGTATACTCAATACTCTTCATCTCATTGGAGTGAAAATATTTGCATCCAAACACACCCTTATGGATTTGATTTTCATGGTTTAACTGAAGAACAAAATAGAGACATTGAACTTGCACAGTTTCTATTTTCAGCAGCTGAAAGAGTAAGTTTTCAACAATTTGAACGTGCAAAAAAATTACTTTTTTATTGTCAATGGAATTCATCTATCACAGGAAACTCTATTCAAAGAATTGTTTTTTATTTTTCTCAAGCACTTCTAGAGAGAATAGAGAAAGAATCAGGAAGAGTGATTAAAGGGTCAGAGAAAAATGAAGAAATTGAGTTAATTCAAAATATGGATCCAAAAAAAGCACTTTCTTGTCATCAAAAAATTCCTTTTAATCAAGTTATGCAATTCACTGGTATACAAGCTATAGTTGAACATGTTATGTTCGAGACGAAAATTCATCTAATAGATCTTAATATAAAAAGTGGAGTTCAATGTATAACTTTGATGCAAGCTTTAGCTGATAGAAAAGATTGCATGGTTGAGATTTTTAAGGTAACTGCTATTGGAGTGAATTCATGCAAGAACAAGATTGAAGAAACCGGTAAAAATTTAGCAAGTTTCGCAGTATCGTTGAACTTACCTTTTTTATTTAAGGCTGTTTTAGTAGAAGATATGTTGGAAATCAAAGAAGATGATTTCGAAATCGAAGAGGACGAAGCTGTTGCTATTTACTCTCCGTATTTTCTAAGGACTTTGATATCAAAGCAAGATAGTATCGAAAATTTGATGAGGGTTATAAGGTGTATCAAACCATCTATAATGATTGTTCTTGAAATTGAAGCAAGTCTAAATTCGCCGTCTTTTGTGAACCGGTTCGTGGAAGCGTTGTTCCACTACTCGGCTTTTTTCGATATACTTGAAACATGTATGAAAGAGGAGGATGAGTGTAGAATGATGACAGAAGGAATATTATCAGCAGGAATAAGAAATATTGTTGCAACAGAAGGTAGTGAAAGGAATGTTAGAAATGTGAAAATTGATGTTTGGAGAAAGTTTTTTGCAAGATATAGAATGGTTGAAACTAGGTTTAGTGAAGCATGTAATTACCAAGCTGAATTAGTGGTTAAAAAGTTTGATTATGGGAATTTTTGCAATGTGGAAAAGAATGGGAAGTGTTTAATATTGGGATGGAAAGGGACTCCAATGCATTCAATTTCAGCTTGGAGGTTTCTTTGA 1581 0.3238 MEINHFSSTHHSLEQLLFQEIHNSNNQKQQEQEFEVVDNNFMSLEDINFNHCQQNNHQNKVSIPKPLQNKMPLSLSSLEILRNHGSRFNKKNIVTKTSSNLEHHRMMSTEEIIRVAGARYTQYSSSHWSENICIQTHPYGFDFHGLTEEQNRDIELAQFLFSAAERVSFQQFERAKKLLFYCQWNSSITGNSIQRIVFYFSQALLERIEKESGRVIKGSEKNEEIELIQNMDPKKALSCHQKIPFNQVMQFTGIQAIVEHVMFETKIHLIDLNIKSGVQCITLMQALADRKDCMVEIFKVTAIGVNSCKNKIEETGKNLASFAVSLNLPFLFKAVLVEDMLEIKEDDFEIEEDEAVAIYSPYFLRTLISKQDSIENLMRVIRCIKPSIMIVLEIEASLNSPSFVNRFVEALFHYSAFFDILETCMKEEDECRMMTEGILSAGIRNIVATEGSERNVRNVKIDVWRKFFARYRMVETRFSEACNYQAELVVKKFDYGNFCNVEKNGKCLILGWKGTPMHSISAWRFL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04663 526 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 102 517 IPR005202 -
Trre14g04663 526 ProSiteProfiles GRAS family profile. 147 524 IPR005202 -
Trre14g04663 526 Pfam GRAS domain family 157 524 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04663 Trre-Chr14 54296809 54298389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04663 146 525 GRAS Transcription Factor Family AT3G03450 29.974 1.70e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre14g04663 GRAS 8.9e-80 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04663 - - gmx:100791952 597.045