Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04645 ATGGAGAAAACCATCCTAGGCAAACTTGAATGGACATTAACTGTGCCTACACCTTTTGTGTTCCTTATACGTTTCATCAAAGCGGCATCGGTCCCTGGTGTTCCTTCTGATCAAGAACCATTGGAGAACATGGCTCATTTTCTTTCTGAATTGGGTATGATGCACTATGCTACCTTAATGTATTGTCCATCAATGGTTGCTGCAGCAGCAGTTTTTGCAGCAAGATGCACTTTGAACAAGAGTCCTGTTTGGAATGAGACACTGAAGATGCACACTGGTTACTCAGAAGAACAGTCAAGGGATTGTGCTAAGTTGCTATCTCTTTTACAATGA 333 0.4204 MEKTILGKLEWTLTVPTPFVFLIRFIKAASVPGVPSDQEPLENMAHFLSELGMMHYATLMYCPSMVAAAAVFAARCTLNKSPVWNETLKMHTGYSEEQSRDCAKLLSLLQ 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04645 110 PANTHER CYCLINS 1 106 IPR039361 -
Trre14g04645 110 SMART cyclin_7 20 108 IPR013763 -
Trre14g04645 110 SMART Cyclin_C_2 16 110 IPR004367 -
Trre14g04645 110 SUPERFAMILY Cyclin-like 15 107 IPR036915 -
Trre14g04645 110 Gene3D - 3 110 - -
Trre14g04645 110 Pfam Cyclin, C-terminal domain 16 107 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04645 Trre-Chr14 54148522 54148854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04645 1 98 Core Cell Cycle Gene Families AT3G11520 66.327 2.61e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04645 K21777 - gmx:547919 159.073