Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04611 ATGCTCTTTCCATGTCAACTTCTTTGTGAGCTGAAGGTCTCAACACATGTTCATCACTTGAATCTGGTGCGATTGATTGGATATTGCGTTGAGGGATCACTTTTCATTGTATATGAACATATTGGCAATGGAAACTTGGGTCAATATTTGCATGGAATAGGGAAAAAACCATTACCATGGTCAAGTAGAGTTCAAATTGCTCTAGATTCAGCAAGAGGCCTTGAATATATTTTTCAAATTCAGGATTCACATAAGAGATAA 261 0.3678 MLFPCQLLCELKVSTHVHHLNLVRLIGYCVEGSLFIVYEHIGNGNLGQYLHGIGKKPLPWSSRVQIALDSARGLEYIFQIQDSHKR 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04611 86 Gene3D Transferase(Phosphotransferase) domain 1 5 85 - -
Trre14g04611 86 SUPERFAMILY Protein kinase-like (PK-like) 6 81 IPR011009 -
Trre14g04611 86 ProSiteProfiles Protein kinase domain profile. 1 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04611 86 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 79 IPR044812 GO:0019199|GO:0045087
Trre14g04611 86 Pfam Protein tyrosine and serine/threonine kinase 6 84 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04611 Trre-Chr14 53876775 53877599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04611 6 79 Receptor kinase-like Gene Family AT3G21630 77.027 1.32e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre14g04611 PK_Tyr_Ser-Thr 2.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04611 - K13429 tpra:123921801 140.584