Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04610 ATGCTCTCAGATCGTGTTCGAATGGATGCTTACTTCAATGCCGTTTTGGAAAACAAGCATCAATTTAAGGATAAGGTTGTTTTGGATGTCGGAGCTGGTAGTGGTATTCTCGCTATATGGTCAGCTCAGGCAGGTGCTAGGAAGGTTTATGCAGTGGAAGCTACTAAGATGTCAGAGGTCCAATGCCAGCCGGAATGCAGATGGTTCCAACGGTTTTACCAGATGGTCGAATTGGCTATGTCCTGTGCAGAAAAAAAGTCCTTTACAAAATCGAAGGAAGAGGTGAGCTCCCTGCCAAAAGAAAGAATAATTTTAGAGAAGATGGAATTGGTTCCATCAATTATGTTGGATTCAAGTCTAATGAACTGTTGCAGTTGA 378 0.4259 MLSDRVRMDAYFNAVLENKHQFKDKVVLDVGAGSGILAIWSAQAGARKVYAVEATKMSEVQCQPECRWFQRFYQMVELAMSCAEKKSFTKSKEEVSSLPKERIILEKMELVPSIMLDSSLMNCCS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04610 125 Gene3D Vaccinia Virus protein VP39 1 122 IPR029063 -
Trre14g04610 125 CDD AdoMet_MTases 27 63 - -
Trre14g04610 125 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 61 IPR025799 GO:0016274|GO:0018216
Trre14g04610 125 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 57 IPR029063 -
Trre14g04610 125 Pfam Ribosomal protein L11 methyltransferase (PrmA) 16 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04610 Trre-Chr14 53875533 53876433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04610 1 63 C2H2 Transcription Factor Family AT3G12270 50.000 3.40e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04610 K11434 - aof:109828764 110.538