Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04587 ATGATCATAACATTACGCCTTATTTTACTAGCCATTTTTCTTTCATTCTCAACAAATACTAGCCAAATTGTATATGCAAAAAGAAACTATAGCAATAATGTTAAGGAAGCTTGCAGTGTCACAAGGTACAAAAATCTTTGCATCCACACACTATCACAATTCTCCAACTCAGCAGGAAGAACCCCAAGCAAATGGGCACGCGCGGGAGTGTCAGTAACAATAGGCGAAGTTAAGAATGTTCAAGCATATCTTACAAAATTAAAAAGGAATGGGAATTTGAAAGGAAGAAACAAAGTTGCGCTTTCGGATTGTATTGAAACTTTTAGCTATGCACTTGATGATCTTCACAAATCACTAGGTGTCCTTAGGAAGCTAAACAAACACACATTTAGTACACAAATGGGGGATCTTAATACATGGATCAGCGCGGCACTTACCGATGAAGATACTTGTCTTGATGGATTCGAAGGAAAAAGTGGAAAGCAAATTAAATTACTGCAAAATAAGGTTCACAATGTTTCTTTTCTAACAAGCAACGCTCTTGCTCTTGTCAACAAACTTGCTTCTACGGGTCTTGGAAGCATCACTGATCCATAG 597 0.3769 MIITLRLILLAIFLSFSTNTSQIVYAKRNYSNNVKEACSVTRYKNLCIHTLSQFSNSAGRTPSKWARAGVSVTIGEVKNVQAYLTKLKRNGNLKGRNKVALSDCIETFSYALDDLHKSLGVLRKLNKHTFSTQMGDLNTWISAALTDEDTCLDGFEGKSGKQIKLLQNKVHNVSFLTSNALALVNKLASTGLGSITDP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04587 198 FunFam Pectinesterase inhibitor 3 29 188 - -
Trre14g04587 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Trre14g04587 198 NCBIfam pectinesterase inhibitor domain 5 187 IPR006501 GO:0004857
Trre14g04587 198 CDD PMEI-like_3 37 189 - -
Trre14g04587 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Trre14g04587 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 189 IPR035513 -
Trre14g04587 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 183 - -
Trre14g04587 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04587 Trre-Chr14 53728758 53729354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04587 34 192 Carbohydrate Esterase AT3G14310 35.366 6.11e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04587 - - gmx:100791264 279.641