Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04508 ATGAGGTTCTTCCTTGTAGCTTCTATGGTTGTGTTATGTTTTCTTGGGATTAGTGAAGGAGGCACCCTTAGAAAGAATTTCTATAGAAATTCATGTCCTCAAGCTGAGGAAATTGTCAAGAACATAACCCAACAACATGTCTCTTCAAGGCCTGAGCTCCCAGCCAAGTTGCTAAGATTGCATTTTCATGATTGTTTTGTTAGGGGGTGTGATGGATCTGTTTTGTTGGAGTCTACTGCAAGTAACACTGCAGAGAAAGATGCAATTCCTAATTTATCATTAGCAGGCTTTGATGTGATCAAGAACATAAAAGATGCTGTGGAGGCAAAATGTCCTGAAACTGTTTCATGTGCTGATATACTCGCATTGGCTGCTAGAGATGCTGTTTCTGTTCAATTTAATAATGAACCAAAGTGGGAAGTGCTTACTGGTAGAAGAGATGGTACTGTGTCCAAAAGCAGTGAAGCACTCATCAATATCCCATCACCTTTCCAAAACATCACCCAGCTCAGACAAATCTTTGCTAGTAAAAAACTTACTCTTCATGATTTGGTTGTTTTATCAGGATCACACACTATTGGAGTAGGACATTGCAATTTGTTTAGTAGGAGACTTTTCAATTTCACTGGAAAAGGTGACCAAGATCCATCTTTGAATCCCACTTATGCAAATTTCTTGAAGACCAAGTGTCAAGGCCTAAGTGACAGAACCACAACAGTAGAAATGGATCCAAATAGGTCAACCAATTTTGATGGAAATTATTATCCTATCCTTCTACAAAATAAAGGTCTCTTCATATCAGATGCTACTCTTCTAACTACTAAGCAATCAAGAAACATTGTTAATGAATTGGTTTCACAGAACAAATTCTTCACTGAATTTGCACAGTCAATGCAAAGGATAGGAGCTATTGAGATTCTCTCAGGTTCTGATGGAGAAATTAGGAAGACGTGCTCTGTTGTTAATTAA 969 0.3808 MRFFLVASMVVLCFLGISEGGTLRKNFYRNSCPQAEEIVKNITQQHVSSRPELPAKLLRLHFHDCFVRGCDGSVLLESTASNTAEKDAIPNLSLAGFDVIKNIKDAVEAKCPETVSCADILALAARDAVSVQFNNEPKWEVLTGRRDGTVSKSSEALINIPSPFQNITQLRQIFASKKLTLHDLVVLSGSHTIGVGHCNLFSRRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDRTTTVEMDPNRSTNFDGNYYPILLQNKGLFISDATLLTTKQSRNIVNELVSQNKFFTEFAQSMQRIGAIEILSGSDGEIRKTCSVVN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04508 322 CDD secretory_peroxidase 23 321 IPR033905 GO:0004601|GO:0042744
Trre14g04508 322 Gene3D - 26 322 - -
Trre14g04508 322 Pfam Peroxidase 41 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Trre14g04508 322 PANTHER PEROXIDASE 25-RELATED 11 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 FunFam Peroxidase 26 172 - -
Trre14g04508 322 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 ProSiteProfiles Plant heme peroxidase family profile. 22 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 Gene3D Peroxidase, domain 2 161 301 - -
Trre14g04508 322 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre14g04508 322 FunFam Peroxidase 161 301 - -
Trre14g04508 322 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04508 Trre-Chr14 53135769 53137757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04508 23 322 Peroxidase AT1G05260 53.795 3.22e-115 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04508 K00430 - mtr:25499574 556.599