Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04452 ATGTTTTTGACTGCAGGTGGTACAACCTCTCCGCGTTATGTGGCCCTTAAAATTCAAAAGAGTGCACAACACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATAGAAGAGGGAGACCCTGATGACAAGAAATGTGTTGTGAAGCTTTTGGATCACTTTAAGCATTCAGGGCCTAATGGTATACACGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTATCGTGGAGTTCCGCTTTCCATGGTTAAAGAAATATGTTTTCATATTTTGGTGGGCTTGTTGGATTATTTGCACCGCGAGCTTTCTGTCATACACACTGACTTGAAGCCAGAGAATGTGTTGCTTCATTCATTGATAGATCCGTGTAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAGGATAAGGCTTTGTCTAATAATGGCACTATCCAAAACAGTAAAATTGGGAATGGAGATTAA 513 0.3977 MFLTAGGTTSPRYVALKIQKSAQHYTEAAMDEIKILKQIEEGDPDDKKCVVKLLDHFKHSGPNGIHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHILVGLLDYLHRELSVIHTDLKPENVLLHSLIDPCKDPRKSGAPLILPNTKDKALSNNGTIQNSKIGNGD 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04452 170 ProSiteProfiles Protein kinase domain profile. 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04452 170 Gene3D Transferase(Phosphotransferase) domain 1 42 132 - -
Trre14g04452 170 Gene3D Phosphorylase Kinase; domain 1 9 73 - -
Trre14g04452 170 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Trre14g04452 170 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 157 - -
Trre14g04452 170 SUPERFAMILY Protein kinase-like (PK-like) 9 129 IPR011009 -
Trre14g04452 170 Pfam Protein kinase domain 12 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g04452 170 SMART serkin_6 8 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04452 Trre-Chr14 52743574 52745664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04452 5 155 EF-hand Containing Proteins AT5G22840 81.457 5.19e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Trre14g04452 Pkinase 1.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04452 K08832 - gmx:100790060 289.271