Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04416 ATGGACCCTACTGATAAAGAAGAGAAGGCTATCTGTGTAATTGGTGATCAATCAACTAGCGATGTTGTGGTGAGGCTACGTACGCAGGAAGGTCGAGATGATCGGTTGTACTGTCACTCAGCGGTACTTGTCAAAAATTGCAAGTATTTTGCAGATCGTTTGTCTGAGAATTGGCCAACTTGTCAGATCCTAGGTTCGCGCAACTGTGTTGATGTTAATTGCCAAGAATCGGATTTTGATTACCATGTAAATCTTATTCGACTTCTCTACATTGTTGTTGATGGTTCGGTTGATGATTTGTGGCATGGTGTTAGAAATGCTCTTGGTATTCTTCAAGTGGCTGTTGAACTTGAATGCCCGAAAATTGTTACTGCGTGTGTGAGTTACTTGGAAGCAATGACATGGGAAGAGAGTGAAGAGGAGGAGATATTGAAAGTTGTACCTCGAATGGGATTACAAGCAGAGCCTATACTAGCTAGAGTTCAACCGGTCAACCAGTTAGCTATTAGAAACATCTTTCTCTCGGCCATTCGTTTTGCTACATCATCCCCTCCGGCGACAATGAAGGATCTGAAATCTTCAGCACAAGAGCAACTTGAGTACATGCTAACTGAGGATGATGATGCCCCTTTGTTGATCGCTGATGACAACATAAAATTTGAGATATTGAGTAAGTTGGAAATAATGGGAGATTTTGTTGAGTGTTGGTTTGATGCATCAGAAAACATTGTCAAAGCACTCGAACAAGGAAGTTCTACAAATGAAGTCGTTGAAGTAAAGTTGCGAGCCATTGAAGTAACATCAAAGGTTTTAGAGGCAATTGCTTATGGTACTGTTATACTGCCAACTGCAAAACGTCTTCAGGTTTTGAAAGTGTGGCTTCCATTTGTGAGGGTTACAAAACCAATTATTGATTCTTCCATGATGGATTCTGAGAATGCTGTTTTGCTTAAAATGGACGGCGAAATGTGGCAATCCCTGGAATCCAGCTTTGTCTCTATCATTCTAGCGTTACCATCAGGGGATCAGGCAGAACTTTTAACTCAATGGTTGGAAAACGAGCATATCCGGTATCCAGATCTGACTGAGGCATTTGAAGTATGGTGTTATAGGTCCAAGGTTGCTAGGAGAAGACTATCATTGCTAGAGGATGATCATGTCATGACACAGTCAGGTTGA 1179 0.4156 MDPTDKEEKAICVIGDQSTSDVVVRLRTQEGRDDRLYCHSAVLVKNCKYFADRLSENWPTCQILGSRNCVDVNCQESDFDYHVNLIRLLYIVVDGSVDDLWHGVRNALGILQVAVELECPKIVTACVSYLEAMTWEESEEEEILKVVPRMGLQAEPILARVQPVNQLAIRNIFLSAIRFATSSPPATMKDLKSSAQEQLEYMLTEDDDAPLLIADDNIKFEILSKLEIMGDFVECWFDASENIVKALEQGSSTNEVVEVKLRAIEVTSKVLEAIAYGTVILPTAKRLQVLKVWLPFVRVTKPIIDSSMMDSENAVLLKMDGEMWQSLESSFVSIILALPSGDQAELLTQWLENEHIRYPDLTEAFEVWCYRSKVARRRLSLLEDDHVMTQSG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04416 392 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 14 219 IPR038920 -
Trre14g04416 392 Gene3D Potassium Channel Kv1.1; Chain A 13 153 IPR011333 -
Trre14g04416 392 SUPERFAMILY POZ domain 18 130 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04416 Trre-Chr14 52432106 52433902 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trre14g04416 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04416 - - gmx:100797958 639.032