Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04397 ATGGCTGATAGGTACTCCCAATTGAACGGTGCCTTCTATGGCCCCGCCATACCACCGACGACGGAGCAACGCCGCTCTAGCTACCGCCGTGATAGAAGCTGTTGTGGTTGTCTCTTTAGCATCTTTTGGAAGATTGTTGTCGCACTCGCGATTCTCTTTGGGCTCATAATTATTATCTTTTATCTCATTGTTCAACCTCGCGCCTTTAAGTTCTATGTTACGAAAGCTCAACTAACCCAATTTGATTACACCAATAGTACACTACACTACAACATGGTGCTCAATTTCACTGCCCGCAACCCAAACAAAAAGCTCGGCATCTATTATGATGATGTGGAGGCTCGAGCATTCTATGAAGGGTCGAGGTTTGCTATTGTTGATGTGATCACATTCAAGAACTCGTTCCGCCAAGACAAGAGGAGAAGTGATCCTATGAGTGGAGTTTTCACAGGACAACAACTGTTGATGCTGAACAACGATCAAGTATCTGAGTTCAACAAAGATAAAAGTGTTGGAGTTTATGGTATTCGTGTGAAGCTCTACTTTAGAATTAGGTTCAAACTTGGAGACTCAATATCCCGCAATTACAAGCCAAAGGTCAAATGTGATCTCAATATTCCCTTGAATTCTAGTAATGCGACCGTTATCTTCAACCGAGTTGTGCCTAACAAGTGCCGCGTTGAATTCTAG 690 0.4333 MADRYSQLNGAFYGPAIPPTTEQRRSSYRRDRSCCGCLFSIFWKIVVALAILFGLIIIIFYLIVQPRAFKFYVTKAQLTQFDYTNSTLHYNMVLNFTARNPNKKLGIYYDDVEARAFYEGSRFAIVDVITFKNSFRQDKRRSDPMSGVFTGQQLLMLNNDQVSEFNKDKSVGVYGIRVKLYFRIRFKLGDSISRNYKPKVKCDLNIPLNSSNATVIFNRVVPNKCRVEF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04397 229 Pfam Late embryogenesis abundant protein 96 202 IPR004864 -
Trre14g04397 229 PANTHER OS05G0367900 PROTEIN 34 211 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04397 Trre-Chr14 52272350 52273039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04397 63 214 SNARE and Associated Proteins AT1G32270 34.591 6.87e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04397 - - tpra:123889192 290.041