Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04396 ATGGCCGATAAGTACTCCCAATTGAATGGTGTCCGCACTAGCCACCATCGCGATAGAAGTTGTTGTTGCTGTCTCTTTAGCATCTTCTGGAAGCTTCTAGTGGCACTCGTCGTCCTATTTGGTCTCATAATCCTTATCTTCTATATCATTGTTCAACCTCGTTCCTTTAAGTTTTATGTAACGAAAGCTGAACTAACCCAATTTGATTACACCAACAACACACTGCACTACAACATGGTGCTTAACTTCATGGCCCATAACCCAAACAAAAAACTCGGCATCTATTATGACAATGTGGAGGCTCAAGCATTCTATGAAGGGTCAAGGTTCGCAAATGTTGATGTGATCACATACAAGAACTCATTCCGCCAAGACAAGAAGAAAAGTGATCCCATGAGTGGCATTTTCTCAGGACAAAAATTGTTGATGCTCGACAATGATCAAGTCTCTGAATTCAATATGGACAAGAATGTTGGAGTTTATGATATTCATGTGAAACTCTACTTCAGAATTAGGTTCAAACTCGGTGACTCGATATCTCACATGTACAAGCCGAAGGTCAAATGTGACCTCAAAGCTGCGTTGAGATCTAGCAATAATGCAACTTTTACCTTCACTCGGATTTTGCCTACTAAGTGCGATGTTCTCTTCTAG 654 0.4083 MADKYSQLNGVRTSHHRDRSCCCCLFSIFWKLLVALVVLFGLIILIFYIIVQPRSFKFYVTKAELTQFDYTNNTLHYNMVLNFMAHNPNKKLGIYYDNVEAQAFYEGSRFANVDVITYKNSFRQDKKKSDPMSGIFSGQKLLMLDNDQVSEFNMDKNVGVYDIHVKLYFRIRFKLGDSISHMYKPKVKCDLKAALRSSNNATFTFTRILPTKCDVLF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04396 217 PANTHER OS05G0367900 PROTEIN 20 198 IPR044839 GO:0098542
Trre14g04396 217 Pfam Late embryogenesis abundant protein 86 179 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04396 Trre-Chr14 52270101 52270754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04396 50 209 SNARE and Associated Proteins AT1G32270 33.333 3.43e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04396 - - psat:127129872 285.034