Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04395 ATGGCCAATATGCAACCTCAAATGAATGACGCTCGCTACGGGCCGACCATTCCATTGGCGCCGGGGCAATCTAGCAGCTACAACCATCCTGGCGACAAAAGTTTTTGTAGTAATCTCTTCAAATTTGTTTGGAGGTTTTTGGTTACACTAGTCATTTTGTTTGGTCTCGTAATTGTTATCTTCTATCTCATTGTTCAACCTCGTGTCTTCAAGTTCTATGTCATGAAAGCCGAATTAACCCAATTCGACTACACAAACAATACACTACACTACAACATGATGCTCAACTTCACGGCCCACAACCCGAACAAAAAACTCAGCATTTATTATGACAAAGTGGAGGCTCGAGCATTCTATGAAGGGTCGAGGTTTGCAAATGTCGATGTGATCACACACATGAACTCGTTTCGTCAATACAAGAAAAGTAGTGACCCTATGAGTGGCGTTTTCTTAGGACAAAAATTGTTGATGTTAGACAATGATCAAGTCACTGATTTCAACAAAGACAAAAGTGTTGGAATTTATGATATCCACGTGAAACTTTACTTTAGAATTAGATTCAAACTCGGAAACTCCATGTCCCGCACATACAAGCCTAAAGTCAAATGTGACCTCAAAGTTCTGTTGAGATTTAACAATAATGCAACGTTTACATTCACTCGGATTTTGGCTTCCAAGTGTGATGTTCTGTTCTAG 696 0.3994 MANMQPQMNDARYGPTIPLAPGQSSSYNHPGDKSFCSNLFKFVWRFLVTLVILFGLVIVIFYLIVQPRVFKFYVMKAELTQFDYTNNTLHYNMMLNFTAHNPNKKLSIYYDKVEARAFYEGSRFANVDVITHMNSFRQYKKSSDPMSGVFLGQKLLMLDNDQVTDFNKDKSVGIYDIHVKLYFRIRFKLGNSMSRTYKPKVKCDLKVLLRFNNNATFTFTRILASKCDVLF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04395 231 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
Trre14g04395 231 PANTHER OS05G0367900 PROTEIN 42 214 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04395 Trre-Chr14 52267981 52268676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04395 64 223 SNARE and Associated Proteins AT1G32270 32.099 4.53e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04395 - - tpra:123889192 299.286