Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04394 ATGCAACATCATTTGAACAACGCTTACTACGGGCCTATCATTCCATTGGTGCCGCGGCAACCCAACAGCTATCGTCACCACTGTGATAGAAGTTGTTGTAGCTATTTGTTCGGCATCTTCTCGAAGCTTCTAATTGCACTTATTGTTCTCTTCGGTCTCATTATCTTTATCTTCTATCTCATTGTTCAACCTCGTGTCTTTAACTTCTATGTCGCGGAAGCTAAGCTAACACAATTTGACTACATCAACAACACACTACATTATAATATGGTGCTCAACTTTACGGTCCATAACTCAAACAAACAATTCAGCATCTATTACGACAAAGTGAAGGCTCGAGCATTCTACGAAAGGTCAAGATTTGCAGATGTCGATGTGATCACACAAATGAACTCATTCCGCCAATATAAGAGGAGTAGTGATCACATGAGATGTGTTTTCTCAGGACAACGACTAATGAAGCTCAACAATGATCAAATATTTGAACTCAACAAAGACAAGAGTCATGGGGTTTATGATATCGACAAGAGTCACGGAATTTATGATATCCATGTGAAACTTTACTTTAAAATTAGGTTCAAATGCGGAGATACAATTTCTCGCAAGTTTAAACCCAAGGTGAAATGTGACCTCAAAGTTCCATTGAGCTCTAGTAATAATGAAACATTTACTTTCAGTAATTGGGTTTTGCCCAACAAATGCAAAGTTGCGTTCTAG 717 0.3849 MQHHLNNAYYGPIIPLVPRQPNSYRHHCDRSCCSYLFGIFSKLLIALIVLFGLIIFIFYLIVQPRVFNFYVAEAKLTQFDYINNTLHYNMVLNFTVHNSNKQFSIYYDKVKARAFYERSRFADVDVITQMNSFRQYKRSSDHMRCVFSGQRLMKLNNDQIFELNKDKSHGVYDIDKSHGIYDIHVKLYFKIRFKCGDTISRKFKPKVKCDLKVPLSSSNNETFTFSNWVLPNKCKVAF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04394 238 PANTHER OS05G0367900 PROTEIN 38 219 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04394 Trre-Chr14 52265733 52266449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04394 61 222 SNARE and Associated Proteins AT1G32270 31.707 1.95e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04394 - - tpra:123889192 360.918