Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04393 ATGCAACCCCAGTTGAACGATTCATACTATGGACCGGCCATTCCACCGGCGGGAGTACAATCCCGCAGCCGCCGCCACCGTGGTGGAAGCGGTTGCGGTTGTTTCTTTAGTATTTTATGGAAGCTTCTAGTTGCACTCGTTGTCCTTTTTGGTCTTATAATTCTTATCTTCTATCTTATTGTTCAACCTCGCCCCTTCAAGTTTTATGTAGCGAAAGCAGAACTAGCCCAGTTTGATTACGCCAACAACACACTACACTACAACATGGTTCTCAACTTCACAGCCCACAACCCAAATAAAAAACTTAGTATCTACTATGATAAAGTCGAAGCACAAGCGTCATATGAAGGGTCGAGGTTTGCTAATGTAGATGTGATCACACACATGAACTCATTTCGCCAAAATAAGAAAAGTAGTGATCCCATGAATGGCATTTTCTCAGGACAAAAATTGTTGATGCTTGACAATGATCAAATCTTTAAGTTTAACAGAGATACGAATATTGGAGTTTATGATATCTATGTGAAACTCTATTTCAGAATTAGGTTTAAACTCGGAGATTCAATAACTCGTACATATAAACCTAAGGTCAAATGTGACCTCACTGTTCCTTTGAGAACCCGCTCTGAAACTAACTTTACCTTCATTCGACTTATACCCACCAAGTGTAGTGTTGAGTTCTAG 684 0.4035 MQPQLNDSYYGPAIPPAGVQSRSRRHRGGSGCGCFFSILWKLLVALVVLFGLIILIFYLIVQPRPFKFYVAKAELAQFDYANNTLHYNMVLNFTAHNPNKKLSIYYDKVEAQASYEGSRFANVDVITHMNSFRQNKKSSDPMNGIFSGQKLLMLDNDQIFKFNRDTNIGVYDIYVKLYFRIRFKLGDSITRTYKPKVKCDLTVPLRTRSETNFTFIRLIPTKCSVEF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04393 227 MobiDBLite consensus disorder prediction 1 22 - -
Trre14g04393 227 PANTHER OS05G0367900 PROTEIN 38 211 IPR044839 GO:0098542
Trre14g04393 227 Pfam Late embryogenesis abundant protein 93 199 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04393 Trre-Chr14 52261472 52262155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04393 60 205 SNARE and Associated Proteins AT1G32270 34.694 5.30e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04393 - - gmx:100807701 280.796