Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04391 ATGGCCGATAACAAACAACCACAATTGAACGGCGCCTATTATGGCCCTGCCATTCCACCGCCAGCACAACCTCGCCACAGCCATCACCGAAGCCGAAGTTGCTGTTCCTGTCTCTCCGGTTTCATTTGGAAGCTTCTAGTCACACTCATCTTTCTTGCTGGACTCGCAGTCCTTATCTTCTATATAATTGTTCAACCCCGCTCCTTCAAATTCTATGTCACGGAAGCTAATCTAACTAAATTCGACTACACAAACAACACATTACACTATGATATGGTGCTCAACTTCACTGCCCGCAACCCAAACAAAAAGCTCAGCATCTACTACGACGAAGTGGAGGCTCGGGCATTCTACGAAGGGGAAAGGTTTGCAAATGTCGATGTCCCCGTATCATTTCGTCAATACAAGAAAAGCAGTAATCCCATGACGGGTGTTTTCTCAGGACCACAATTGTTGATGCTCGACAATGATCAAGTCTCTGAGTTCAATAAAGATAAGAATGTTGAAGTCTATGATATCTATGTGAAGCTCTACTTCAGGATTAGGTTTAGGCTCGGAGATTTGATATCGGGTGATTACAAACCCAAGGTGAAATGTCACCTCAAAGTTCCATTGACTTCGAATAATACCACCGCAACCTTCACTCCGCTTATGCCTACCAAGTGCGATGTTGATTTCTACTAA 684 0.443 MADNKQPQLNGAYYGPAIPPPAQPRHSHHRSRSCCSCLSGFIWKLLVTLIFLAGLAVLIFYIIVQPRSFKFYVTEANLTKFDYTNNTLHYDMVLNFTARNPNKKLSIYYDEVEARAFYEGERFANVDVPVSFRQYKKSSNPMTGVFSGPQLLMLDNDQVSEFNKDKNVEVYDIYVKLYFRIRFRLGDLISGDYKPKVKCHLKVPLTSNNTTATFTPLMPTKCDVDFY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04391 227 Pfam Late embryogenesis abundant protein 96 194 IPR004864 -
Trre14g04391 227 PANTHER OS05G0367900 PROTEIN 32 209 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04391 Trre-Chr14 52255670 52256353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04391 63 218 SNARE and Associated Proteins AT1G32270 33.962 6.64e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04391 - - gmx:100795302 301.212