Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04390 ATGTGCTCACTTAGCTGGAAAATCGAAGGTCCCCAATGGAGGGTTAAGCGTGTGTGCATGGATTCATATATTATTAAAAAATTCTGTGCTGATGGGGATTTCTTTACTCCTGTAAAGACTATGTCCCAGGTCATTGATCTTGGGTCGGACAATGACGCCATGCATGAGAAACAACAATTGAATGGAGCCTACTATGGCCCATCAATCCCACCACCAAAATCCTACCACCGTCCATCACGCGGCGGCGGTTTCGACTGTTGCTGTGGTTGTCTCTTCAACCTCATCTTCAAACTAATCCTCACCGTCATAATAATCGTCGGCATCGTCGTCTTTCTCTTCTGGCTCATAGTTCGTCCCAACGTTGTCAAAGTTCATGTCACAGAAGCAACTCTCACACACTTCAACTACACAAACAGCAACAGCAACCTTAACTATGATCTTTCCTTAAACATCACAATTCGCAACCCAAATAAAAAACTAGGAATTTACTACGATTACATCGAAGCTAGAGCATTATACCATGATGTTAGAGTTGACTCTGTTTTGCTTGACCCATTTTATCAAGGACATAAAAGTACTAGCTTGTTGAATCCTTCATTTAAGGGTCAGAAAGTGATTGTTCTTGGTGCTGATCAGAGTTTGGATTTGAGTAAAGAAAAAGATGCAGGTGTTTATGAGATTGTTGTGAAGATGTATCTTAGAGTAAGGTTTAAATTGGGTGTGATTAAGACAAGGAAGATTAAGCCAAAGATTACATGTGAGTTGCGTATTCCTTTGAAGTCTGCCGGTGGTGGTTCGTCGGCCGGTGGTGGTTTTGAGACCACCAAGTGTGATTGGGATCGTTGA 846 0.4208 MCSLSWKIEGPQWRVKRVCMDSYIIKKFCADGDFFTPVKTMSQVIDLGSDNDAMHEKQQLNGAYYGPSIPPPKSYHRPSRGGGFDCCCGCLFNLIFKLILTVIIIVGIVVFLFWLIVRPNVVKVHVTEATLTHFNYTNSNSNLNYDLSLNITIRNPNKKLGIYYDYIEARALYHDVRVDSVLLDPFYQGHKSTSLLNPSFKGQKVIVLGADQSLDLSKEKDAGVYEIVVKMYLRVRFKLGVIKTRKIKPKITCELRIPLKSAGGGSSAGGGFETTKCDWDR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04390 281 Pfam Late embryogenesis abundant protein 150 253 IPR004864 -
Trre14g04390 281 PANTHER OS05G0367900 PROTEIN 86 261 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04390 Trre-Chr14 52246053 52249166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04390 116 271 SNARE and Associated Proteins AT1G32270 40.385 1.15e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04390 - - gmx:100793187 310.071