Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04381 ATGTCTGGCTCCAGAAAGAAGCTTCTTCTGAACACTGTGTCGGTGAAACTAGGCTGTGGAAGCTGCAGAAAGCTAAAGCTAAGTAACATATTCAATCCAAAACCCAAGAACCCCACTTATCAAAAACACAAACTTTACAATAATCAGTACTCCTCTTCTTCAGGTCCTTGGAGTAGTACTGAAGACAAATATGACAGTACAAGCACTCCAAATACCACCACTACTACCAACACTGCCACCACATTTTCACCCTTGTATCAATCAAACTTTTCTGATTCAGAGACCTATGCAAAGGACCAGAGAAGAGTAGGAGGTTTAGGTAGAGCTGGAGGAGAAGGTGTTGCTGTGGAGAAAGATTCTGAAGATCCTTATCTTGATTTCAGACATTCCATGCTTCAAATGATATTGGAAAATGAGATATACTCAAAAGATGATCTTAGAGAGCTTCTGAATTGCTTTCTTCAGCTGAATGAACCGTATCACCATGGTGTTATAGTCAGAGCTTTTACTGAGATTTGGAATGGTGTCTCTTTGAGGTCTAGTTCAACCAGGGTCCATACAACTCGGACCCGTAAGCCACGCAGACATTAA 591 0.4129 MSGSRKKLLLNTVSVKLGCGSCRKLKLSNIFNPKPKNPTYQKHKLYNNQYSSSSGPWSSTEDKYDSTSTPNTTTTTNTATTFSPLYQSNFSDSETYAKDQRRVGGLGRAGGEGVAVEKDSEDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNEPYHHGVIVRAFTEIWNGVSLRSSSTRVHTTRTRKPRRH 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04381 196 Pfam Transcriptional repressor, ovate 120 175 IPR006458 -
Trre14g04381 196 ProSiteProfiles OVATE domain profile. 116 175 IPR006458 -
Trre14g04381 196 MobiDBLite consensus disorder prediction 30 80 - -
Trre14g04381 196 NCBIfam uncharacterized plant-specific domain TIGR01568 114 174 IPR006458 -
Trre14g04381 196 MobiDBLite consensus disorder prediction 32 80 - -
Trre14g04381 196 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 53 178 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04381 Trre-Chr14 52195505 52196095 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre14g04381 Ovate 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04381 - - mtr:25499452 311.997