Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04380 ATGGTGAACAAAAAAACATTGAATCTCTCTTCTCTTCTCAAAAACACAGAACTCAAATATTCATCTTCATGGCCATGGCCTTATTGTCACCAACCAAAAACACTCTCTTTCAGAGCTGAAAACAACATTAACAAAGATGATACATTCAAAATCATCAACTCAGCTTATTTGGATACTTCTGAAGAATCATCTTTAACTGTTTCTCAAAATTCTGATTCAACTTTTTCAAAACCTTCTTTTGAGGAATCCAAACAAAATGATTCGGTCGAAACTGTGATTCGAGGATTATCTTCTGATCGATTTTTCTTCGAGCCAGATGAGACTAAATCCATTTTAGAAGCTAATAATAAAGCTGCTGTAGCAGCAGGAAGTGAAACTACTCAAAGTTTGCCATTCAAAGATAGTGTTGTGTTATCTATGGAATCTCGAGATCCTTATGTCGATTTTCGAAAATCTATGGAGGAAATGGTAGAAACTCATGATGTTAAAGATTGGGAAAGTCTTCAAGAGCTTTTGTGTTGGTATTTGAAGGTCAATGAGAAAAACAATCATGGATATATTGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTGCTTCGTCTTCATCATCGTTTTCTTCTTCATCTTCTTCGTCTTCTCATTCTCCTTCTTCTCCTTTATCGTTTTATAGTTCTTCTTTGTCTTCGTCTTATAGCACTCGCTGTGTTTCTTGTATGGAAGCTCGCGGTGAAGAGGTTGATACTCCAAGTTCTTCTTTGTTGTTAGAACAGGTTAGGGAGGAAGAAGAGGTTGATACTCCGAGTTCTTCATTGGTGTTAGAACAAGTTAGGGAGGAGATTGATCACGAAAATGAAGTTGAAGCTTCAGAGTCTGAAACTTCAATTTCATCTTCGTCATCAAGTACTTAA 915 0.3617 MVNKKTLNLSSLLKNTELKYSSSWPWPYCHQPKTLSFRAENNINKDDTFKIINSAYLDTSEESSLTVSQNSDSTFSKPSFEESKQNDSVETVIRGLSSDRFFFEPDETKSILEANNKAAVAAGSETTQSLPFKDSVVLSMESRDPYVDFRKSMEEMVETHDVKDWESLQELLCWYLKVNEKNNHGYIVGAFVDLLVGLAFASSSSSFSSSSSSSSHSPSSPLSFYSSSLSSSYSTRCVSCMEARGEEVDTPSSSLLLEQVREEEEVDTPSSSLVLEQVREEIDHENEVEASESETSISSSSSST 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04380 304 ProSiteProfiles OVATE domain profile. 138 197 IPR006458 -
Trre14g04380 304 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 50 199 IPR038933 GO:0045892
Trre14g04380 304 MobiDBLite consensus disorder prediction 277 291 - -
Trre14g04380 304 MobiDBLite consensus disorder prediction 247 304 - -
Trre14g04380 304 Pfam Transcriptional repressor, ovate 142 198 IPR006458 -
Trre14g04380 304 NCBIfam uncharacterized plant-specific domain TIGR01568 136 199 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04380 Trre-Chr14 52179517 52180431 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre14g04380 Ovate 2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04380 - - psat:127125591 345.895