Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04351 ATGGAAAATATGGCACCGGGTTATCGTTTCTATCCTACAGAAGAAGAGCTTATTTCGTTCTATCTTCACAAAATGCTTGAAGGAGAGAATCAATATTTGATTCGTACTGTTATACCGGTTGTTAATATATACGATTATAATCCATCACAACTTCCACAAATTTCAGGAGAGGCTAGTATGATTGACAAGGAACAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGTGAGAGGAGGAAGACCAAGACGTCTCACAACAACCGGGTATTGGAAAGCCACCGGATCTCCTAATCATGTTTATTCGTCCGATAATCGCGTCATTGGCATGAAAAGAACTATGGTTTTCTATTCTGGAAGAGCTCCAAATGGAAAGAAAACCGATTGGAAAATGAATGAGTATAAGGCCATTCAGTTAGATCATGAAGCATCCTCTTCAAATAAACTAGAACCCAAGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAGAAATCAAAGTGCTTGAGAGCATTTGATAGAAGACCAGCACCAAGGAGGGTTACACCACTTGTTCAAAATGCTCAAGAGCACCAAAAGGACTCAATATGCGATCATGATGTTCAAATGTTGATGAGGATAAGTGCAACAAGTTCCCCTGAGAGTTGTTCCTCTATAGATAACCATCATGGCCAACCCTCACAAGAAGTAGGAGAGGCTAGCCAAATGGATATTAATGGTAACTACCAGCCTTTGTTGGATTGGGAGAGTGTGAATTGGTTCTTGGAATCAGAGATATAG 780 0.3987 MENMAPGYRFYPTEEELISFYLHKMLEGENQYLIRTVIPVVNIYDYNPSQLPQISGEASMIDKEQWFFFIPRQESEVRGGRPRRLTTTGYWKATGSPNHVYSSDNRVIGMKRTMVFYSGRAPNGKKTDWKMNEYKAIQLDHEASSSNKLEPKLRQEFSLCRVYKKSKCLRAFDRRPAPRRVTPLVQNAQEHQKDSICDHDVQMLMRISATSSPESCSSIDNHHGQPSQEVGEASQMDINGNYQPLLDWESVNWFLESEI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04351 259 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Trre14g04351 259 MobiDBLite consensus disorder prediction 212 231 - -
Trre14g04351 259 Gene3D NAC domain 13 169 IPR036093 GO:0003677|GO:0006355
Trre14g04351 259 ProSiteProfiles NAC domain profile. 4 165 IPR003441 GO:0003677|GO:0006355
Trre14g04351 259 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 213 - -
Trre14g04351 259 SUPERFAMILY NAC domain 3 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04351 Trre-Chr14 51927727 51930109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04351 2 253 NAC Transcription Factor Family AT3G44350 44.882 1.05e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre14g04351 NAM 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04351 - - psat:127125619 418.313