Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04338 ATGCTAGGGAAAAATATTATATCCATCAAGAAACTGACGAAGAAGGTGAAGACTATAGGTAGAGTTGACCAAGATCCTGCTCACTGTGGTTTGTTGAAAGAATATGAGCAAGAAAAAAAGTACACAATCAACAAAACTTTTGGGTCTAAAAAAAGTGGTGTTTTTGCACTATATGTTGGTGAGGAACGACAAAGATATGTGGTTCCAACTAGCTACCTTTGTCATCCCTTATTCAAGATGTTGTTGGAGAAAGCTTACAATGAATTTGGGTTTGAACAAAGAAATGGTTTGGTAGTTCCATGTAGTGTTTCAGCATTTTTGGAAGTTGTTAATGCTATAGAATGTAACAATTGTAAGTTTGATATGGGAAATATTTTTGATGAGTTGATTTAA 393 0.341 MLGKNIISIKKLTKKVKTIGRVDQDPAHCGLLKEYEQEKKYTINKTFGSKKSGVFALYVGEERQRYVVPTSYLCHPLFKMLLEKAYNEFGFEQRNGLVVPCSVSAFLEVVNAIECNNCKFDMGNIFDELI 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04338 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 108 IPR003676 GO:0009733
Trre14g04338 130 Pfam Auxin responsive protein 49 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04338 Trre-Chr14 51813282 51813674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04338 53 116 Calmodulin-binding Proteins AT5G20810 51.562 2.89e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04338 K14488 - gmx:100776885 167.162