Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g04333 ATGGATACATTAAGCCCTGCAGTCTTTGTCAATGCTGAACTGTTACCCTTTTATGTTGGAAGAAGAGTTCGTACTGTCATGCAGGTTTTGCGATCTGATGGTGTAGCTGTCATTGGAAAATCACCAGATGAGAAGCAGTTGATTGTAAAAGGATCACCCCCTCCCGCTCCTCTTACAAGTTTTGTAGAAGTTATTGGTATTGTTAACAGTGACAAGTCCATCAAAGCTGAGTTATGGACCAATTTTGGTGATGCAATTGATATGTTCAGCTACAATAAGCTTTGTCAGCTCGCAAATGGAGATTTTAAACAGTTGTTTCTGTGA 324 0.4012 MDTLSPAVFVNAELLPFYVGRRVRTVMQVLRSDGVAVIGKSPDEKQLIVKGSPPPAPLTSFVEVIGIVNSDKSIKAELWTNFGDAIDMFSYNKLCQLANGDFKQLFL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g04333 107 CDD RPA3 6 106 - -
Trre14g04333 107 Gene3D - 3 107 IPR012340 -
Trre14g04333 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
Trre14g04333 107 SUPERFAMILY Nucleic acid-binding proteins 6 106 IPR012340 -
Trre14g04333 107 Pfam Replication factor A protein 3 6 105 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g04333 Trre-Chr14 51770548 51771037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g04333 1 107 Core DNA Replication Machinery Family AT4G18590 59.813 2.58e-46 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g04333 K10740 - gmx:100306641 169.859